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ATPase

Euk-Vir

Heliothis_virescens_ascovirus_3g

ATPase__YP_009702088__Heliothis_virescens_ascovirus_3g__1246651

Identity

Accession:
YP_009702088 ↗
Protein ID:
ATPase
Kingdom:
euk

Quality

70.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Ascoviridae› Ascovirus› Heliothis_virescens_ascovirus_3g

TaxID: 1246651

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-176
PDB
Domain cluster: rep: MK170447__AZF89918.1__X__00084__D3-182
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09250.17 best Prim-Pol 41.2 3.40e-10 90.3% 73.4%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g71A01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.66 55.0 4.98e-01 87.5% 75.4%
2atzA00 3.90.920.20 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like 0.61 53.0 5.33e-01 92.0% 97.2%
3aqpA02 3.30.70.3220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 31.0 3.27e-01 74.4% 56.9%
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.54 32.0 3.97e-01 73.9% 97.1%
1gx5A03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 33.0 3.78e-01 83.5% 89.3%
3mtkA00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.50 34.0 3.58e-01 80.1% 73.6%
2qyxB01 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.50 31.0 3.80e-01 75.6% 98.2%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4959587 862.1.1.3 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol 0.76 69.0 7.07e-01 100.0% 98.8%
4960053 862.1.1.3 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol 0.75 65.0 6.43e-01 91.5% 100.0%
5058297 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.73 67.0 5.73e-01 99.4% 96.8%
5000831 862.1.1.5 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.72 65.0 5.57e-01 97.2% 97.1%
5050906 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.71 66.0 5.41e-01 100.0% 94.3%
5019731 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.71 59.0 4.79e-01 86.9% 89.7%
4985674 862.1.1.5 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.71 64.0 5.47e-01 97.7% 95.7%
4552974 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.71 58.0 5.24e-01 86.9% 86.3%
4940975 862.1.1.5 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.71 60.0 5.00e-01 89.8% 91.5%
4215083 304.48.1.10 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS 0.55 35.0 4.03e-01 98.3% 86.2%
4007900 304.48.1.14 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF 0.52 36.0 3.40e-01 80.1% 56.7%
4880194 304.48.1.14 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF 0.52 35.0 3.69e-01 80.1% 73.2%
4637527 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 36.0 4.23e-01 82.4% 100.0%
3605458 309.1.1.16 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C 0.52 39.0 2.46e-01 76.7% 31.2%
3891425 11.1.1.839 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DAG1 0.51 35.0 3.98e-01 78.4% 96.8%
D2 high residues 198-282
PDB
Domain cluster: rep: GfV-C21-ORF2__YP_001029425__Ichnoviriform_fumiferanae__419435__D108-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08707.17 best PriCT_2 60.5 2.30e-16 90.6% 94.8%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dcfA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 52.0 4.43e-01 85.9% 81.0%
3f2eA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 43.0 4.39e-01 76.5% 68.7%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.64 50.0 4.98e-01 85.9% 89.9%
3m1mA03 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.64 50.0 4.60e-01 84.7% 85.5%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.64 50.0 4.64e-01 84.7% 85.2%
8ex5A02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.63 47.0 3.53e-01 80.0% 90.5%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.62 48.0 4.57e-01 84.7% 80.2%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.60 47.0 3.76e-01 83.5% 63.3%
2es9A00 1.20.1290.30 Mainly Alpha › Up-down Bundle › AhpD-like › 0.60 49.0 4.70e-01 92.9% 90.0%
1urvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 46.0 3.84e-01 83.5% 72.1%
2fozA00 1.10.4080.10 Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 0.60 50.0 3.36e-01 92.9% 78.8%
4iluA02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.59 45.0 4.20e-01 82.4% 70.3%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 44.0 4.01e-01 81.2% 64.1%
6tkyA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.58 42.0 3.82e-01 78.8% 96.7%
7kypB01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.57 39.0 2.73e-01 70.6% 70.0%
2mhkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 37.0 3.34e-01 77.6% 48.0%
2prrA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.55 39.0 3.48e-01 75.3% 81.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.51e-01 77.6% 75.2%
8jpdG01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.54 37.0 3.12e-01 77.6% 41.4%
1aluA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 45.0 3.78e-01 98.8% 87.3%
3h2zA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.52 45.0 3.66e-01 100.0% 72.7%
3kp9A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.52 45.0 3.68e-01 97.6% 74.1%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.65e-01 76.5% 77.6%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.50 37.0 3.93e-01 77.6% 87.8%
4dddA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 37.0 3.05e-01 78.8% 88.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964648 2008.1.1.59 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.68 50.0 3.64e-01 77.6% 40.0%
3217577 101.1.1.75 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.67 45.0 5.24e-01 72.9% 98.3%
3420040 4133.1.1.2 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 0.62 46.0 3.82e-01 78.8% 60.6%
3744784 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 47.0 3.98e-01 83.5% 52.0%
3715090 109.24.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 0.60 45.0 4.15e-01 81.2% 80.9%
3591954 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 45.0 3.33e-01 80.0% 33.6%
3942571 101.1.1.198 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.60 40.0 4.39e-01 80.0% 90.8%
3958271 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.59 43.0 3.36e-01 78.8% 93.3%
4529157 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.58 47.0 4.63e-01 89.4% 98.9%
3531345 109.4.1.498 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 0.58 42.0 3.33e-01 78.8% 66.7%
3382098 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.58 42.0 3.77e-01 78.8% 52.8%
3855699 150.1.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.57 45.0 3.63e-01 84.7% 67.9%
3839043 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.57 43.0 3.38e-01 82.4% 99.5%
3710423 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 42.0 3.76e-01 80.0% 84.0%
4359404 1002.1.1.1 ↗ alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB 0.56 42.0 3.78e-01 83.5% 83.1%
3704864 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.54 40.0 3.67e-01 81.2% 89.2%
3423128 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.52 38.0 3.16e-01 76.5% 68.7%
5005386 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 39.0 2.99e-01 82.4% 66.3%
3815499 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.51 38.0 3.19e-01 77.6% 66.4%
3492714 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.51 43.0 3.47e-01 97.6% 57.2%
4927596 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.50 42.0 3.71e-01 94.1% 96.9%
3968917 5050.1.1.60 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3 0.50 34.0 2.60e-01 70.6% 56.6%
5053358 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.50 38.0 3.42e-01 97.6% 56.8%
D3 high residues 465-563
PDB
Domain cluster: rep: GfV-D2-ORF1__YP_001029430__Ichnoviriform_fumiferanae__419435__D371-461
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.61 41.0 4.12e-01 98.0% 68.7%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.60 33.0 4.05e-01 97.0% 91.2%
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.57 36.0 3.54e-01 72.7% 58.7%
7e5aB02 1.20.1000.10 Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain 0.56 37.0 3.20e-01 87.9% 40.9%
1nktA02 3.90.1440.10 Alpha Beta › Alpha-Beta Complex › Pre-protein croslinking domain of SecA › SecA, preprotein cross-linking domain 0.56 39.0 3.72e-01 99.0% 60.7%
3mvcB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 44.0 3.88e-01 90.9% 88.3%
1tu9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 45.0 4.10e-01 90.9% 92.4%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 44.0 3.93e-01 90.9% 91.8%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 43.0 3.82e-01 89.9% 93.3%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 33.0 3.41e-01 86.9% 67.0%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.50 38.0 3.87e-01 90.9% 82.5%
1vb5A01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.50 34.0 3.48e-01 89.9% 71.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3576491 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 43.0 4.56e-01 98.0% 89.4%
3323882 5051.1.1.6 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.58 45.0 3.18e-01 84.8% 65.0%
4032235 3264.1.1.0 ↗ 0.56 42.0 3.57e-01 80.8% 65.9%
4959717 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.56 40.0 3.14e-01 76.8% 95.2%
3388553 109.4.1.703 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CTLH 0.55 38.0 3.12e-01 71.7% 74.6%
5021171 246.2.1.9 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.54 39.0 3.06e-01 76.8% 95.7%
4934384 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.53 36.0 3.90e-01 96.0% 82.4%
3699758 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.52 46.0 3.49e-01 100.0% 74.8%
3606470 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 37.0 3.04e-01 77.8% 88.2%
3496457 304.9.1.78 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28978 0.50 39.0 3.84e-01 87.9% 77.3%
5021443 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.50 39.0 3.92e-01 100.0% 86.0%
D4 high residues 855-938
PDB
Domain cluster: rep: GfV-C20-ORF1__YP_001029423__Ichnoviriform_fumiferanae__419435__D884-966
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.41e-01 98.8% 98.6%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.70e-01 97.6% 63.5%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.62e-01 97.6% 80.7%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.47e-01 96.4% 79.3%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.58 46.0 4.59e-01 97.6% 80.9%
4e2aA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 47.0 3.85e-01 92.9% 98.8%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 43.0 3.27e-01 97.6% 32.7%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 41.0 3.27e-01 95.2% 38.2%
3l4gC01 3.30.1370.240 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 46.0 4.29e-01 97.6% 71.4%
3lysA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 42.0 3.98e-01 91.7% 67.6%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 27.0 3.11e-01 72.6% 64.4%
4wkrA02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 33.0 3.49e-01 100.0% 68.1%
3g8wB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 45.0 3.72e-01 94.0% 96.3%
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 3.35e-01 97.6% 40.8%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.54 44.0 4.32e-01 95.2% 79.6%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.54 45.0 4.48e-01 95.2% 87.2%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.54 35.0 3.89e-01 94.0% 87.5%
2fmaA00 3.30.1490.140 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Amyloidogenic glycoprotein, copper-binding domain 0.54 33.0 3.70e-01 97.6% 84.7%
2zw5A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 3.65e-01 95.2% 94.3%
6j09A01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.54 33.0 3.66e-01 71.4% 77.6%
3dluA00 3.30.56.30 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit 0.54 39.0 3.81e-01 77.4% 77.9%
8a9xA01 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.54 31.0 3.24e-01 91.7% 61.3%
4kvxA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 3.70e-01 92.9% 98.0%
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 45.0 3.60e-01 95.2% 91.5%
2vzyC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 43.0 3.44e-01 94.0% 82.0%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 43.0 3.52e-01 94.0% 96.0%
2i79D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.58e-01 95.2% 98.2%
4wp3C00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.51 39.0 3.05e-01 82.1% 67.9%
3d3bJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.51 41.0 4.10e-01 85.7% 97.7%
3l8dA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.30e-01 94.0% 52.5%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.19e-01 95.2% 35.6%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.27e-01 95.2% 52.8%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.44e-01 92.9% 97.5%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.51 41.0 3.62e-01 92.9% 70.1%
3tmaA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 38.0 3.05e-01 82.1% 72.3%
3f41A01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 41.0 2.91e-01 92.9% 79.1%
2vxaA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.50 33.0 3.55e-01 94.0% 84.8%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5034107 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 55.0 5.51e-01 97.6% 80.0%
4978533 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 56.0 4.82e-01 98.8% 56.3%
3519165 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.73e-01 97.6% 89.4%
5014176 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 54.0 4.35e-01 97.6% 45.6%
5003128 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 5.03e-01 98.8% 73.0%
5045983 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 55.0 5.20e-01 97.6% 76.0%
3957963 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 47.0 4.56e-01 92.9% 66.3%
3481547 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.66 59.0 4.83e-01 97.6% 63.3%
4976218 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 53.0 4.75e-01 98.8% 62.5%
3926827 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.63 56.0 3.40e-01 100.0% 16.8%
4971711 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 55.0 4.89e-01 98.8% 71.2%
5077356 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 56.0 4.88e-01 98.8% 72.0%
3827266 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 56.0 4.67e-01 100.0% 86.9%
3413597 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.62 55.0 3.62e-01 98.8% 23.8%
5081950 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 55.0 5.01e-01 100.0% 73.9%
3933222 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.61 55.0 4.46e-01 98.8% 59.4%
4971999 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 54.0 4.75e-01 98.8% 72.0%
3972091 101.1.2.668 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28010 0.61 47.0 4.95e-01 97.6% 94.7%
3610083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 53.0 5.07e-01 100.0% 86.0%
3439148 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.60 54.0 4.25e-01 100.0% 64.0%
3238923 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.60 53.0 3.24e-01 98.8% 25.3%
5045098 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.59 52.0 5.09e-01 100.0% 91.1%
3642698 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 36.0 4.30e-01 77.4% 92.7%
5044199 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.58 49.0 3.48e-01 92.9% 65.9%
4024901 328.3.1.0 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.58 45.0 4.51e-01 95.2% 81.2%
3788427 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.58 51.0 4.85e-01 98.8% 87.0%
3173396 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 51.0 4.65e-01 98.8% 92.7%
3549847 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.57 49.0 3.25e-01 98.8% 35.7%
4948780 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.57 42.0 3.24e-01 96.4% 34.5%
4965043 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.56 42.0 4.36e-01 97.6% 85.9%
3280725 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.56 47.0 3.89e-01 94.0% 98.1%
3776086 306.10.1.5 ↗ a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF31088 0.56 41.0 3.59e-01 78.6% 88.5%
3807768 2003.1.5.115 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 0.56 43.0 3.04e-01 95.2% 25.8%
4951898 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 47.0 3.84e-01 92.9% 96.1%
4629452 2003.1.5.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.55 41.0 3.04e-01 95.2% 29.1%
3603693 101.1.2.145 ↗ alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.55 48.0 3.86e-01 98.8% 49.4%
5046881 328.8.1.0 ↗ a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 0.54 47.0 4.30e-01 96.4% 81.8%
3317802 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.54 36.0 3.52e-01 76.2% 61.1%
3312923 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 36.0 3.48e-01 76.2% 60.0%
4945000 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 44.0 3.16e-01 94.0% 57.1%
360636 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.54 44.0 3.40e-01 94.0% 83.8%
None — 0.53 43.0 3.52e-01 94.0% 96.0%
3688701 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.53 43.0 3.37e-01 94.0% 91.2%
4856700 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.53 41.0 3.25e-01 82.1% 89.6%
5065348 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 44.0 3.54e-01 94.0% 91.8%
4619396 2003.1.5.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.52 39.0 2.86e-01 95.2% 28.5%
3611407 306.10.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 0.52 39.0 3.40e-01 79.8% 94.5%
3379022 70.3.1.11 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND 0.52 45.0 3.09e-01 100.0% 27.1%
3967652 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 45.0 3.35e-01 97.6% 94.2%
4941791 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.52 39.0 3.04e-01 97.6% 34.8%
3959682 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 37.0 3.86e-01 94.0% 82.7%
3280916 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.51 42.0 3.52e-01 94.0% 96.9%
5049300 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.51 40.0 3.32e-01 90.5% 97.7%
3252158 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.51 43.0 3.19e-01 97.6% 37.9%
4941691 2008.1.1.16 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.51 41.0 3.43e-01 90.5% 64.3%
4184822 2002.1.1.69 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MM_CoA_mutase 0.50 43.0 2.59e-01 96.4% 50.5%
5072976 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.50 43.0 3.31e-01 95.2% 43.1%
None — 0.50 40.0 2.93e-01 86.9% 57.4%
D5 medium residues 322-417
PDB
D6 medium residues 648-787
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 35.0 2.70e-08 86.4% 93.8%