←Back to structures

ATPase

Euk-Vir

Lymphocystis_disease_virus_4

ATPase__YP_010087925__Lymphocystis_disease_virus_4__2704413

Identity

Accession:
YP_010087925 ↗
Protein ID:
ATPase
Kingdom:
euk

Quality

78.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Lymphocystivirus› Lymphocystis_disease_virus_4

TaxID: 2704413

Cluster

View cluster (27 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 798-864
PDB
Domain cluster: rep: D5_family_NTPase_ATPase__YP_010084866__Shrimp_hemocyte_iridescent_virus__2039780__D809-878
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 6.70e-01 100.0% 97.4%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.52e-01 97.0% 91.4%
2ysrA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.95e-01 97.0% 87.6%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.65 42.0 4.65e-01 73.1% 84.9%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.14e-01 97.0% 93.9%
1s1eA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 51.0 3.75e-01 88.1% 38.1%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 52.0 5.01e-01 89.6% 89.3%
2xubA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.84e-01 97.0% 76.1%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.62 51.0 4.81e-01 97.0% 96.6%
1pp0B00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.62 49.0 3.62e-01 91.0% 60.8%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.80e-01 97.0% 71.4%
3hx4A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.61 51.0 3.68e-01 95.5% 51.2%
2x51A06 3.30.70.1590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 45.0 4.56e-01 80.6% 94.0%
2f33A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 50.0 4.70e-01 97.0% 81.6%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 42.0 3.98e-01 74.6% 96.2%
7wboA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 41.0 3.03e-01 73.1% 98.9%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.54e-01 98.5% 90.5%
2r2iA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 46.0 4.27e-01 88.1% 73.6%
3umgA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 43.0 4.28e-01 83.6% 91.5%
5mmiJ02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.56 45.0 4.46e-01 89.6% 100.0%
2q5wD00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.56 47.0 4.49e-01 95.5% 81.8%
2sasA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 44.0 3.28e-01 89.6% 37.8%
4mfzA02 3.40.630.120 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.55 43.0 3.40e-01 86.6% 57.8%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 46.0 4.15e-01 100.0% 78.2%
1icrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.55 46.0 3.31e-01 98.5% 67.1%
4v19K02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.54 42.0 4.09e-01 91.0% 100.0%
2r1iA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 40.0 3.29e-01 83.6% 44.6%
7ovuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 41.0 2.96e-01 85.1% 38.9%
6xu3D01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.52 42.0 3.30e-01 89.6% 69.1%
1i12D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 40.0 3.10e-01 86.6% 36.3%
1kfiA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.51 39.0 3.30e-01 86.6% 92.9%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 36.0 3.59e-01 77.6% 87.5%
1p5zB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 43.0 3.03e-01 100.0% 87.3%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 74.0 7.16e-01 98.5% 98.7%
4973290 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 74.0 7.35e-01 100.0% 100.0%
5003621 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 74.0 6.55e-01 100.0% 78.9%
5029778 101.1.2.43 ↗ alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.82 74.0 6.66e-01 100.0% 86.7%
3993626 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.82 75.0 6.89e-01 100.0% 87.1%
5022021 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 73.0 6.07e-01 100.0% 68.7%
3883278 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.80 71.0 6.36e-01 100.0% 78.9%
3498779 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.78 69.0 6.40e-01 100.0% 91.8%
3537242 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.78 68.0 6.04e-01 100.0% 76.0%
3480455 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 6.48e-01 100.0% 97.5%
3743842 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 6.11e-01 100.0% 79.0%
3177239 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.77 67.0 5.36e-01 100.0% 55.6%
3898745 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.76 66.0 5.93e-01 100.0% 84.2%
4159466 4020.1.1.0 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.71 60.0 4.80e-01 97.0% 47.4%
3696367 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 53.0 5.19e-01 83.6% 74.7%
5035389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.41e-01 97.0% 74.1%
3401082 101.1.2.352 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 0.69 61.0 5.19e-01 100.0% 69.1%
4022896 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 4.39e-01 97.0% 50.0%
3240959 7558.1.1.0 ↗ a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.69 59.0 5.07e-01 97.0% 84.5%
4182618 101.1.2.616 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27833 0.69 59.0 5.14e-01 98.5% 72.4%
3449832 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.68 58.0 4.00e-01 97.0% 87.5%
3642660 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 59.0 4.56e-01 100.0% 72.3%
3804896 108.1.1.26 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.68 52.0 4.37e-01 83.6% 54.8%
3371657 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 57.0 5.22e-01 94.0% 100.0%
4953964 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 57.0 4.93e-01 97.0% 70.9%
3297020 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.67 51.0 4.53e-01 83.6% 63.0%
3962321 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.15e-01 100.0% 88.0%
3579831 101.1.2.188 ↗ alpha arrays › HTH › HTH › winged helix domain › Roquin_1_2-like_ROQ 0.67 57.0 4.74e-01 97.0% 60.0%
3919633 108.1.1.104 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 0.67 53.0 3.89e-01 88.1% 46.5%
3456717 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 48.0 4.91e-01 77.6% 83.1%
3503756 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 5.03e-01 83.6% 98.6%
3954639 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 5.30e-01 98.5% 85.9%
3266319 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 53.0 4.59e-01 88.1% 61.9%
3643758 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 52.0 4.01e-01 86.6% 60.0%
3596843 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 52.0 4.65e-01 86.6% 85.3%
3881263 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.66 57.0 5.13e-01 98.5% 85.3%
3313301 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 53.0 4.90e-01 88.1% 76.5%
3705956 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.66 51.0 4.62e-01 86.6% 86.3%
3521127 108.1.1.98 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.65 52.0 3.81e-01 88.1% 36.8%
3324564 108.1.1.51 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › NADPH_Ox 0.65 52.0 3.83e-01 88.1% 86.7%
3304542 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.65 50.0 4.49e-01 83.6% 66.3%
4169937 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.65 56.0 5.06e-01 98.5% 82.1%
1154435 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.65 53.0 5.23e-01 89.6% 93.0%
None — 0.65 56.0 4.11e-01 95.5% 89.7%
3464462 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 3.93e-01 97.0% 34.1%
4642199 108.1.1.26 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.65 54.0 5.21e-01 92.5% 90.7%
3904232 101.1.2.37 ↗ alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.65 54.0 4.85e-01 97.0% 81.0%
None — 0.64 49.0 3.67e-01 83.6% 37.1%
3659093 108.1.1.162 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › NADPH_Ox, EF-hand_5, EF-hand_7 0.64 55.0 4.08e-01 95.5% 89.7%
3438142 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.64 53.0 4.32e-01 91.0% 64.0%
3555794 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.64 52.0 4.83e-01 89.6% 81.2%
5027755 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 54.0 5.13e-01 95.5% 81.2%
3908024 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.63 52.0 4.81e-01 91.0% 91.8%
3317563 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.62 52.0 4.32e-01 97.0% 72.0%
3628499 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 45.0 3.97e-01 85.1% 52.0%
4024889 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.62 53.0 4.43e-01 98.5% 85.0%
3227144 3277.2.1.1 ↗ alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C 0.62 50.0 4.39e-01 92.5% 77.1%
4560905 108.1.1.30 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 0.61 52.0 4.28e-01 97.0% 76.2%
3647082 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.68e-01 97.0% 68.4%
4445757 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.61 49.0 4.77e-01 89.6% 88.0%
4946290 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.95e-01 97.0% 93.8%
3670960 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.60 45.0 4.25e-01 83.6% 71.8%
4607820 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.60 51.0 4.15e-01 97.0% 76.2%
3911815 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.59 49.0 4.77e-01 95.5% 93.3%
9411 2003.1.5.26 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.56 44.0 2.79e-01 85.1% 50.7%
3783419 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 47.0 3.56e-01 95.5% 51.2%
3839206 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.56 45.0 4.38e-01 95.5% 87.5%
5016400 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.56 47.0 3.21e-01 97.0% 39.2%
3846669 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.55 41.0 2.40e-01 83.6% 11.1%
3486418 170.1.1.0 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C 0.55 44.0 4.01e-01 91.0% 82.1%
None — 0.54 44.0 2.70e-01 97.0% 36.0%
3492894 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.53 43.0 3.71e-01 94.0% 78.3%
3735701 129.1.1.16 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.52 42.0 3.37e-01 89.6% 84.3%
4236753 2005.1.1.25 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 0.51 40.0 2.51e-01 88.1% 51.2%
3494701 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.50 40.0 2.79e-01 91.0% 46.5%
D2 medium residues 1-58_157-174_198-228
PDB
D3 medium residues 59-69_86-118_145-156_175-197_229-259
PDB
Domain cluster: representative
D4 medium residues 260-332_511-528
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08707.17 best PriCT_2 61.7 9.60e-17 82.4% 92.2%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dlaA01 1.20.930.50 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.66 47.0 3.94e-01 75.8% 68.8%
2fji102 1.10.357.70 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex component Sec6, C-terminal domain 0.65 45.0 3.56e-01 72.5% 34.7%
3ebbA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 42.0 3.01e-01 71.4% 25.8%
5lnxF01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.59 46.0 4.29e-01 85.7% 91.5%
2jifA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.59 46.0 4.26e-01 85.7% 91.5%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.59 41.0 4.11e-01 74.7% 85.6%
1bucA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.58 45.0 4.16e-01 85.7% 94.3%
5af7A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.58 45.0 4.32e-01 85.7% 96.4%
1rx0C01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.58 46.0 4.21e-01 86.8% 91.1%
2qvaA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.58 40.0 3.65e-01 72.5% 84.5%
2hraA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 39.0 3.95e-01 71.4% 78.0%
5iduA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.56 43.0 4.05e-01 85.7% 93.3%
5domA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.53 38.0 3.87e-01 75.8% 86.7%
3lszA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 35.0 3.19e-01 70.3% 55.2%
1k0oB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 37.0 3.40e-01 78.0% 72.4%
1xd4A04 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.50 43.0 3.33e-01 97.8% 83.9%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077614 182.1.3.3 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.67 47.0 5.12e-01 72.5% 96.0%
5043574 182.1.3.3 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.63 56.0 5.05e-01 97.8% 84.8%
4494836 182.1.3.3 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.63 55.0 4.91e-01 97.8% 80.8%
5045965 182.1.3.3 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.62 54.0 5.28e-01 94.5% 91.0%
3257295 109.4.1.18 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA 0.62 43.0 2.98e-01 71.4% 24.5%
5072206 182.1.3.3 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.60 52.0 4.81e-01 96.7% 92.5%
4676230 5060.1.1.1 ↗ alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 0.54 43.0 3.26e-01 86.8% 56.0%
4927006 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.53 37.0 3.44e-01 72.5% 67.8%
D5 medium residues 333-494
PDB
Domain cluster: rep: D5_family_helicase__YP_009173524__Chrysochromulina_ericina_virus__455364__D416-543
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08706.17 best D5_N 40.2 6.00e-10 77.2% 56.5%
D6 medium residues 495-510_529-585_725-797
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971338 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.51 40.0 3.19e-01 81.5% 85.5%
D7 medium residues 586-724
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764