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AY007505.3__AAP81921.1__X__00039
Bact-VirAY007505.3__AAP81921.1__X__00039
Identity
- Accession:
- AY007505 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-111
Domain cluster:
rep: MK814750.1__QCG77018.1__SEA_EWALD_9__00009__D86-180
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ipcA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.72 | 59.0 | 4.33e-01 | 89.0% | 87.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3985522 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.68 | 47.0 | 4.63e-01 | 71.4% | 71.0% |
| 4005910 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.65 | 44.0 | 4.28e-01 | 71.4% | 63.0% |
| 3394342 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.63 | 45.0 | 3.32e-01 | 74.7% | 29.8% |
| 3642887 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 46.0 | 3.46e-01 | 79.1% | 85.5% |
| 3995965 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.59 | 42.0 | 3.36e-01 | 76.9% | 36.8% |
| 3573934 | 109.4.1.959 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec3_C-term | 0.55 | 47.0 | 3.27e-01 | 100.0% | 86.7% |