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AY129338.1__AAN12846.1__PBI_OMEGA_204__00203
Bact-VirAY129338.1__AAN12846.1__PBI_OMEGA_204__00203
Identity
- Accession:
- AY129338 ↗
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Taxonomy
TaxID: 2907835
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-52
Domain cluster:
representative
D2
high
residues 72-147
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hu9A01 | 2.20.25.270 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 38.0 | 4.15e-01 | 100.0% | 80.3% |
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.53 | 35.0 | 3.89e-01 | 85.5% | 86.9% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.53 | 42.0 | 3.28e-01 | 90.8% | 91.3% |
| 2nyfA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.52 | 43.0 | 2.91e-01 | 94.7% | 94.4% |
| 2hqyA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 37.0 | 2.97e-01 | 77.6% | 44.6% |
| 1dpbA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 41.0 | 3.04e-01 | 94.7% | 36.2% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 43.0 | 3.17e-01 | 100.0% | 81.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941624 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 38.0 | 4.38e-01 | 100.0% | 92.0% |
| 3289194 | 227.1.1.16 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PF26572 | 0.59 | 48.0 | 4.29e-01 | 94.7% | 89.6% |
| 4992092 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.53 | 39.0 | 4.09e-01 | 81.6% | 95.7% |