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AY247757.2__AAP78666.1__X__00001

Bact-Vir

AY247757.2__AAP78666.1__X__00001

Identity

Accession:
AY247757 ↗
Kingdom:
phage

Quality

76.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 100-180
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.77 69.0 6.54e-01 97.5% 87.2%
2keyA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.76 69.0 6.15e-01 100.0% 74.1%
3sqiA01 1.10.150.540 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.71 61.0 5.70e-01 96.3% 76.8%
6jlzA01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.63 44.0 4.09e-01 74.1% 57.4%
1fafA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.61 45.0 4.60e-01 81.5% 91.1%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.60 34.0 4.22e-01 98.8% 90.2%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.59 51.0 4.65e-01 97.5% 94.4%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 40.0 3.65e-01 70.4% 82.1%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 44.0 4.66e-01 100.0% 94.2%
3ns4A00 1.10.357.110 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus 0.58 40.0 3.02e-01 71.6% 46.8%
2rreA00 1.10.10.2010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 40.0 4.19e-01 75.3% 89.2%
3dpuA03 1.10.10.2200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 38.0 3.96e-01 70.4% 74.7%
5fb0A02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.56 49.0 4.49e-01 100.0% 80.4%
4yxtA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.56 48.0 4.03e-01 100.0% 53.9%
3lsjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 41.0 3.38e-01 79.0% 56.9%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.56 41.0 4.23e-01 80.2% 93.3%
3hgkE00 1.20.1280.110 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.56 34.0 3.53e-01 96.3% 63.6%
3di1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 40.0 2.78e-01 77.8% 43.1%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.54 41.0 4.30e-01 100.0% 87.8%
3s7zA01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 47.0 4.10e-01 98.8% 79.8%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.54 45.0 4.52e-01 98.8% 97.7%
5afdA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 41.0 2.86e-01 86.4% 63.0%
1f7uA02 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.53 38.0 3.42e-01 79.0% 72.0%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.52 34.0 3.45e-01 98.8% 67.9%
2vunA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 43.0 3.08e-01 95.1% 97.7%
6rxaA01 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.51 42.0 4.17e-01 100.0% 88.5%
5ha6B00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 36.0 3.65e-01 100.0% 75.9%
4gpkB01 1.25.40.1000 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 35.0 3.33e-01 72.8% 83.8%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.50 42.0 4.24e-01 100.0% 94.9%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4655797 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.84 76.0 7.15e-01 97.5% 87.4%
4979940 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.81 74.0 6.64e-01 100.0% 77.3%
3737296 192.2.1.18 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.67 39.0 3.32e-01 97.5% 36.2%
5057187 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.61 52.0 3.46e-01 100.0% 22.4%
3315602 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.58 51.0 4.78e-01 100.0% 98.0%
4255175 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.58 49.0 3.56e-01 100.0% 50.4%
3709824 101.21.1.0 alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit 0.57 41.0 4.46e-01 79.0% 98.5%
3347726 150.1.1.104 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Piezo_THU9_anchor 0.57 48.0 4.18e-01 96.3% 92.3%
5053994 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.56 40.0 4.14e-01 95.1% 80.0%
3319492 3923.1.1.1 alpha bundles › Mitotic chromosome determinant-related protein N-terminal domain › Mitotic chromosome determinant-related protein N-terminal domain › Mitotic chromosome determinant-related protein N-terminal domain › Rad21_Rec8_N 0.55 37.0 3.78e-01 77.8% 70.0%
4208977 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.55 45.0 3.62e-01 92.6% 50.6%
4955816 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.54 37.0 3.41e-01 70.4% 61.8%
4209288 4336.1.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.53 42.0 3.79e-01 87.7% 70.4%
4453815 192.12.1.1 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Prok-TraM 0.53 37.0 3.55e-01 98.8% 62.1%
3634546 632.15.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.53 37.0 3.84e-01 95.1% 78.7%
3477418 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.53 36.0 3.47e-01 100.0% 60.0%
5081529 3931.1.1.0 alpha bundles › MtlR-like › MtlR-like › MtlR-like 0.52 44.0 3.76e-01 93.8% 70.4%
3469433 1134.1.1.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.52 34.0 3.44e-01 82.7% 66.3%
3971706 5071.3.1.1 alpha bundles › cytochrome bc1 complex 11 kDa protein-like › DUF465 › DUF465 › DUF465 0.52 40.0 4.31e-01 100.0% 98.6%
3700717 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.52 39.0 2.96e-01 84.0% 67.6%
5002539 101.1.2.906 alpha arrays › HTH › HTH › winged helix domain › DUF1016_N 0.51 36.0 3.41e-01 76.5% 61.9%
D2 high residues 207-322_365-419
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 58.7 9.00e-16 90.1% 80.8%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.89 77.0 6.89e-01 88.3% 84.2%
4a8eA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.85 77.0 7.62e-01 100.0% 90.5%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.85 73.0 6.70e-01 88.9% 90.0%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.82 63.0 6.35e-01 88.9% 79.4%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.80 68.0 6.82e-01 88.9% 92.5%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.79 67.0 6.43e-01 88.9% 89.2%
1ae9A00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.77 71.0 7.20e-01 96.5% 97.1%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.72 60.0 6.23e-01 100.0% 93.7%
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.69 58.0 5.29e-01 88.9% 82.7%
4acoA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.66 62.0 4.85e-01 100.0% 65.2%
3hn2A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.50 35.0 3.95e-01 86.5% 95.3%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4007744 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 78.0 7.27e-01 88.9% 88.8%
3588206 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 63.0 6.74e-01 70.8% 92.0%
3954716 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 62.0 6.87e-01 70.8% 95.7%
3589779 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 61.0 6.57e-01 70.2% 96.7%
3587374 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 61.0 6.28e-01 70.8% 94.5%
5030307 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 59.0 6.93e-01 70.8% 95.2%
5028332 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 58.0 6.81e-01 70.2% 93.6%
3586881 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 60.0 6.37e-01 70.2% 95.3%
4965640 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 82.0 7.30e-01 100.0% 92.6%
4637388 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 68.0 6.85e-01 88.9% 82.4%
3983469 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 58.0 6.79e-01 71.3% 94.4%
3979114 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 61.0 7.03e-01 83.6% 96.2%
5016981 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 56.0 6.72e-01 70.8% 95.0%
3946063 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.72e-01 100.0% 91.3%
4007467 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.31e-01 100.0% 84.1%
4997941 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.44e-01 100.0% 92.4%
4071300 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 59.0 6.58e-01 70.2% 97.0%
4998701 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 73.0 7.16e-01 88.9% 88.3%
4994277 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 73.0 7.14e-01 88.9% 84.4%
4962932 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 58.0 5.98e-01 70.2% 97.0%
4004773 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 57.0 6.71e-01 70.8% 94.4%
5016957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 72.0 7.15e-01 88.3% 94.9%
4959579 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 58.0 6.56e-01 70.8% 97.0%
4973226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 56.0 6.70e-01 72.5% 96.7%
4999495 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 80.0 7.88e-01 100.0% 97.2%
4380833 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 68.0 6.95e-01 88.9% 86.7%
4930303 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 53.0 6.50e-01 70.2% 95.7%
4965845 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 71.0 6.83e-01 88.3% 88.4%
5003452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 57.0 6.56e-01 70.2% 97.7%
3945675 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 59.0 6.55e-01 72.5% 94.3%
4183457 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 66.0 7.11e-01 88.9% 96.6%
4965169 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 71.0 6.55e-01 88.9% 91.4%
4981577 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 56.0 6.51e-01 70.8% 93.6%
5059725 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 70.0 6.86e-01 88.9% 83.3%
4999472 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 79.0 7.57e-01 100.0% 98.9%
5083506 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 71.0 6.88e-01 88.9% 85.9%
4153666 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 57.0 6.40e-01 70.2% 92.6%
5000880 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 69.0 6.78e-01 88.9% 82.2%
4004713 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 59.0 6.65e-01 80.1% 92.6%
4200953 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 59.0 6.18e-01 72.5% 93.5%
4004483 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 70.0 6.72e-01 88.3% 82.6%
5052541 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 57.0 6.67e-01 70.8% 96.8%
4475168 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 70.0 6.68e-01 88.9% 82.1%
5002702 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 70.0 6.71e-01 88.9% 80.5%
5058518 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 77.0 7.35e-01 100.0% 92.8%
4021119 101.1.8.7 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › NDC10_II 0.81 76.0 5.99e-01 100.0% 66.0%
4981966 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 69.0 6.50e-01 88.9% 81.5%
5073434 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 76.0 7.21e-01 100.0% 95.5%
4969226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 57.0 6.40e-01 71.9% 97.8%
5061203 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 70.0 6.76e-01 90.6% 83.7%
4998614 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 76.0 7.06e-01 100.0% 97.1%
4392937 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 64.0 6.72e-01 88.9% 91.6%
4992939 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 74.0 7.47e-01 100.0% 98.2%
3964171 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.80 67.0 6.70e-01 88.9% 85.6%
4954527 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 75.0 6.83e-01 100.0% 87.7%
3969558 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.79 55.0 6.16e-01 70.2% 91.1%
4966027 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 68.0 6.61e-01 88.9% 82.6%
4954640 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.77 73.0 6.92e-01 100.0% 96.5%
5008693 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.77 73.0 6.76e-01 100.0% 93.3%
3964657 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 66.0 6.28e-01 88.9% 84.1%
5011490 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 53.0 5.72e-01 70.8% 92.0%
150341 101.1.8.8 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.76 64.0 6.58e-01 100.0% 93.1%
5041911 101.1.8.8 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.76 65.0 6.62e-01 100.0% 92.7%
5012504 101.1.8.8 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.74 68.0 6.73e-01 100.0% 93.3%
5076857 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 67.0 6.71e-01 99.4% 98.3%
5008464 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 66.0 6.42e-01 100.0% 99.5%
D3 high residues 490-541
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12728.14 best HTH_17 48.5 1.20e-12 96.2% 94.1%
CATH (82)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.81 71.0 5.20e-01 100.0% 60.0%
4h17A00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.80 38.0 2.45e-01 100.0% 11.7%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.80 73.0 6.25e-01 100.0% 75.9%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.80 69.0 5.22e-01 100.0% 44.4%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.79 70.0 5.33e-01 100.0% 67.8%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.79 69.0 5.38e-01 100.0% 49.6%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.79 68.0 6.16e-01 100.0% 80.6%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.78 69.0 6.16e-01 100.0% 91.8%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.78 69.0 5.57e-01 100.0% 67.7%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 67.0 5.72e-01 100.0% 61.2%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 67.0 6.18e-01 100.0% 94.0%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 64.0 4.85e-01 100.0% 44.6%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.15e-01 78.8% 73.1%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 4.83e-01 73.1% 63.5%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 4.46e-01 73.1% 52.6%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.01e-01 78.8% 71.9%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 4.69e-01 78.8% 56.3%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.84e-01 73.1% 72.4%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.41e-01 84.6% 47.1%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 4.86e-01 78.8% 69.8%
1z4hA01 1.10.238.160 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.69 59.0 5.77e-01 100.0% 91.4%
4at7B02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.68 37.0 2.50e-01 80.8% 14.1%
2jmlA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 57.0 5.03e-01 100.0% 75.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 3.79e-01 84.6% 38.3%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 4.61e-01 84.6% 65.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.64e-01 84.6% 70.8%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 46.0 2.76e-01 73.1% 11.2%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 55.0 5.11e-01 100.0% 77.9%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 3.85e-01 90.4% 38.7%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 4.06e-01 100.0% 45.1%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.37e-01 92.3% 64.7%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 4.72e-01 92.3% 69.0%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 4.05e-01 98.1% 42.3%
4cvnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 47.0 3.30e-01 84.6% 35.2%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 4.67e-01 98.1% 71.6%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 3.97e-01 98.1% 41.0%
1rp0A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 45.0 3.02e-01 100.0% 18.2%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 3.93e-01 98.1% 39.1%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 52.0 4.61e-01 100.0% 65.4%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.61e-01 100.0% 63.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.43e-01 98.1% 70.8%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 53.0 4.43e-01 100.0% 60.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 54.0 4.03e-01 100.0% 41.9%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 52.0 4.51e-01 100.0% 76.8%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.20e-01 100.0% 62.0%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 3.82e-01 100.0% 41.9%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 4.38e-01 98.1% 72.9%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 3.93e-01 100.0% 46.0%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.34e-01 100.0% 66.7%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.03e-01 98.1% 50.5%
5c8qB02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.57 38.0 3.97e-01 94.2% 80.4%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.00e-01 84.6% 75.7%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 45.0 4.31e-01 86.5% 73.3%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 3.57e-01 100.0% 35.8%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.13e-01 100.0% 69.3%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.15e-01 100.0% 67.8%
5hmpB02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 45.0 4.34e-01 98.1% 90.6%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.57 45.0 3.07e-01 100.0% 48.3%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 3.82e-01 100.0% 52.3%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 50.0 3.70e-01 98.1% 40.3%
6qdjA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 45.0 4.17e-01 100.0% 93.4%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 4.08e-01 98.1% 73.0%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.04e-01 98.1% 69.3%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 3.56e-01 100.0% 39.6%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.55 46.0 3.35e-01 100.0% 35.6%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.55 37.0 3.81e-01 94.2% 76.0%
1repC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 3.52e-01 96.2% 65.9%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 44.0 4.10e-01 100.0% 88.9%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 48.0 4.25e-01 100.0% 73.3%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 4.01e-01 100.0% 77.2%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.54 40.0 3.87e-01 100.0% 72.1%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.54 33.0 3.24e-01 92.3% 53.3%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.88e-01 96.2% 75.0%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.54 44.0 3.28e-01 100.0% 36.5%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 3.78e-01 98.1% 57.9%
2k77A00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.53 41.0 2.99e-01 84.6% 65.5%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.60e-01 98.1% 59.2%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.45e-01 100.0% 39.6%
4byfC01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.52 44.0 3.77e-01 100.0% 70.8%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.65e-01 90.4% 75.3%
3zriA01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.51 41.0 3.00e-01 92.3% 63.6%
1m3qA02 1.10.1670.10 Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.50 35.0 3.20e-01 90.4% 51.2%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.99 89.0 9.13e-01 94.2% 98.0%
3281256 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.98 92.0 7.77e-01 100.0% 65.0%
4527613 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.98 86.0 7.23e-01 92.3% 60.8%
3954117 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.98 92.0 7.58e-01 100.0% 61.2%
3278372 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.97 86.0 7.82e-01 92.3% 73.8%
4375315 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.97 83.0 8.55e-01 90.4% 94.0%
4176315 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.96 84.0 8.30e-01 92.3% 88.9%
3955723 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.96 80.0 8.23e-01 88.5% 92.0%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.96 84.0 8.56e-01 92.3% 96.0%
5070666 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.96 86.0 8.49e-01 96.2% 92.7%
3953197 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.95 89.0 7.06e-01 100.0% 54.7%
5082561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.95 79.0 8.09e-01 88.5% 94.0%
4995042 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.95 86.0 7.08e-01 96.2% 94.1%
4547937 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.95 88.0 8.45e-01 100.0% 89.7%
5047649 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.92 79.0 8.10e-01 92.3% 98.0%
4191032 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.91 79.0 8.08e-01 100.0% 98.0%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.90 79.0 7.81e-01 96.2% 92.7%
4181286 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.90 70.0 7.47e-01 82.7% 95.6%
5027627 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.90 82.0 8.07e-01 100.0% 96.4%
5073619 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.90 80.0 7.39e-01 96.2% 95.4%
4548007 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 81.0 6.80e-01 100.0% 61.2%
1710781 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 79.0 7.70e-01 98.1% 89.3%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.88 77.0 7.58e-01 96.2% 92.7%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.88 82.0 8.07e-01 100.0% 94.5%
5032504 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.88 78.0 7.70e-01 100.0% 92.7%
3838564 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.88 80.0 7.60e-01 100.0% 86.7%
3589130 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 76.0 7.52e-01 100.0% 90.9%
5002797 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 76.0 7.25e-01 94.2% 81.7%
4933561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 75.0 7.38e-01 96.2% 89.1%
2168161 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 78.0 7.58e-01 100.0% 89.5%
4974775 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.86 75.0 7.14e-01 98.1% 83.3%
3589467 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.86 75.0 6.28e-01 100.0% 58.8%
4682727 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.85 76.0 7.51e-01 100.0% 94.5%
5053673 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.85 77.0 7.10e-01 100.0% 84.6%
4992437 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.85 71.0 6.77e-01 98.1% 78.3%
3285399 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.85 68.0 6.92e-01 94.2% 90.0%
3962562 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.85 77.0 5.95e-01 98.1% 86.7%
4643722 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.84 67.0 6.84e-01 88.5% 92.0%
5028046 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 70.0 6.95e-01 96.2% 90.9%
3385701 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.83 71.0 7.01e-01 100.0% 90.9%
3840108 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.83 72.0 6.93e-01 100.0% 86.7%
3589675 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 70.0 7.12e-01 96.2% 100.0%
3958314 101.1.9.66 alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH 0.82 66.0 6.48e-01 96.2% 83.6%
5007668 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 72.0 5.38e-01 100.0% 67.2%
3284686 101.1.9.84 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.81 72.0 4.63e-01 100.0% 23.5%
3974460 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.80 72.0 5.31e-01 100.0% 66.2%
4668445 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.80 71.0 7.01e-01 100.0% 94.5%
1827815 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 71.0 6.52e-01 100.0% 76.5%
3949463 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 70.0 5.42e-01 100.0% 48.7%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 69.0 5.52e-01 100.0% 53.3%
4929856 101.1.9.18 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.79 69.0 5.76e-01 100.0% 57.8%
3966930 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 69.0 5.42e-01 100.0% 79.1%
4520820 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 70.0 6.19e-01 100.0% 69.3%
4518241 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 68.0 6.06e-01 100.0% 73.3%
3975516 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.78 68.0 5.42e-01 100.0% 49.5%
3284779 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 68.0 5.06e-01 98.1% 59.2%
3286117 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 66.0 5.04e-01 100.0% 44.0%
3279459 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 68.0 5.15e-01 100.0% 42.3%
3291218 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 67.0 5.01e-01 100.0% 47.7%
3290830 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 68.0 5.23e-01 100.0% 60.9%
4266122 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 68.0 5.58e-01 100.0% 57.9%
3976015 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 66.0 5.80e-01 100.0% 65.0%
4954942 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 65.0 6.06e-01 96.2% 89.2%
3278826 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.76 67.0 5.10e-01 100.0% 43.3%
4051681 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 66.0 4.89e-01 100.0% 41.5%
4090636 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 66.0 5.99e-01 100.0% 80.0%
3948669 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.75 64.0 4.97e-01 96.2% 49.6%
5030468 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 62.0 5.27e-01 98.1% 58.9%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.73 62.0 5.49e-01 100.0% 77.5%
3979434 101.1.9.101 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 0.72 60.0 5.95e-01 100.0% 92.7%
3205121 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 65.0 5.59e-01 100.0% 73.8%
4021723 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 64.0 5.19e-01 100.0% 62.1%
2876157 101.1.9.105 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.71 61.0 6.15e-01 100.0% 98.1%
3946974 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.71 61.0 4.94e-01 100.0% 50.5%
4979405 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 4.51e-01 78.8% 65.0%
3723668 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 3.90e-01 92.3% 33.1%
4965902 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 4.58e-01 100.0% 54.3%
4970959 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 55.0 5.05e-01 100.0% 78.6%
4439804 101.1.2.546 alpha arrays › HTH › HTH › winged helix domain › Methyltransf_2 0.61 51.0 3.07e-01 100.0% 13.2%
3189146 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 3.95e-01 98.1% 45.8%
4953298 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.59 51.0 3.81e-01 98.1% 41.5%
5051539 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.58 50.0 3.89e-01 98.1% 48.7%
5071075 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.58 50.0 4.28e-01 98.1% 61.2%
None 0.58 47.0 2.75e-01 100.0% 9.4%
4933514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 3.64e-01 100.0% 92.1%
140657 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.56 50.0 3.69e-01 98.1% 39.7%
3788382 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.56 49.0 4.29e-01 100.0% 73.8%
3837892 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 2.88e-01 100.0% 15.2%
4395667 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.15e-01 98.1% 65.0%
3826771 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.55 45.0 3.59e-01 100.0% 41.6%
3180104 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.55 49.0 4.11e-01 100.0% 61.1%
2760149 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.54 47.0 3.95e-01 100.0% 57.6%
5073598 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.52 43.0 3.74e-01 100.0% 76.7%
3804069 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.52 43.0 3.66e-01 100.0% 56.8%
5040315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.46e-01 92.3% 63.3%
3935822 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.51 39.0 3.45e-01 94.2% 70.0%
3516486 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.50 43.0 3.68e-01 100.0% 64.4%
D4 medium residues 32-51_66-96
PDB