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AY299121.1__AAP58724.1__X__00057

Bact-Vir

AY299121.1__AAP58724.1__X__00057

Identity

Accession:
AY299121 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-61
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.76 57.0 4.52e-01 79.7% 73.0%
1j0wB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.76 57.0 4.67e-01 79.7% 58.3%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.75 57.0 4.80e-01 79.7% 62.4%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 52.0 3.90e-01 74.6% 32.9%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 53.0 4.57e-01 78.0% 63.7%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.72 49.0 3.93e-01 78.0% 35.9%
2ijaA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.72 50.0 3.15e-01 72.9% 19.9%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 53.0 4.63e-01 79.7% 64.8%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 51.0 4.21e-01 76.3% 53.4%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 50.0 4.06e-01 74.6% 64.5%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 53.0 4.54e-01 79.7% 57.3%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 52.0 4.32e-01 79.7% 64.0%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.69 48.0 3.98e-01 74.6% 65.7%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 50.0 3.95e-01 76.3% 41.5%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 48.0 4.06e-01 74.6% 67.0%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 48.0 3.91e-01 74.6% 67.6%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 51.0 4.13e-01 81.4% 62.4%
4zn4A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 53.0 3.22e-01 88.1% 34.2%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.66 42.0 3.70e-01 71.2% 43.2%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 49.0 3.91e-01 79.7% 56.5%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 49.0 3.93e-01 79.7% 43.4%
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 47.0 4.11e-01 78.0% 69.2%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.65 50.0 4.04e-01 86.4% 76.5%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 47.0 3.93e-01 79.7% 61.7%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 51.0 3.25e-01 88.1% 26.5%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 47.0 4.04e-01 79.7% 63.5%
6hgcA01 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.64 44.0 3.13e-01 74.6% 71.2%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.63 48.0 3.94e-01 86.4% 46.2%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 47.0 3.85e-01 79.7% 63.0%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 51.0 3.25e-01 88.1% 37.6%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 46.0 4.08e-01 79.7% 67.8%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 52.0 3.18e-01 91.5% 35.2%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.62 48.0 3.75e-01 86.4% 37.5%
7kcgA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 43.0 3.29e-01 72.9% 67.7%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.62 44.0 3.45e-01 74.6% 46.3%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.61 42.0 3.76e-01 71.2% 68.3%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 50.0 3.18e-01 100.0% 45.0%
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.60 47.0 3.20e-01 93.2% 38.1%
3fewX02 3.30.1310.40 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › 0.60 44.0 3.70e-01 88.1% 48.4%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.59 51.0 3.86e-01 98.3% 46.6%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.58 43.0 3.02e-01 81.4% 39.5%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 47.0 3.00e-01 93.2% 38.1%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 47.0 2.99e-01 93.2% 37.3%
3vwcA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 40.0 3.07e-01 74.6% 100.0%
2obdA01 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.57 49.0 3.23e-01 98.3% 31.8%
1sqwA01 3.10.450.220 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 39.0 3.46e-01 72.9% 86.0%
4bv4R00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 40.0 2.40e-01 72.9% 14.5%
1yqeA01 3.40.630.50 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like 0.57 36.0 2.59e-01 91.5% 19.9%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.57 49.0 3.51e-01 98.3% 56.6%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.57 47.0 3.86e-01 94.9% 51.8%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 39.0 3.26e-01 84.7% 92.0%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 36.0 3.04e-01 76.3% 67.3%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 40.0 3.21e-01 94.9% 61.0%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.50 34.0 2.64e-01 71.2% 58.7%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3609692 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.78 59.0 3.50e-01 81.4% 21.0%
3600881 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 59.0 3.23e-01 81.4% 13.0%
3501913 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.77 58.0 4.29e-01 79.7% 42.9%
3211396 5.1.4.167 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st 0.77 55.0 3.32e-01 74.6% 18.0%
3515415 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 54.0 2.92e-01 74.6% 6.7%
3923579 5.1.4.167 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st 0.75 53.0 3.21e-01 74.6% 17.8%
3702466 220.1.1.80 beta barrels › PH domain-like › PH domain-like › PH domain-like › RME-8_N 0.74 56.0 4.40e-01 81.4% 81.7%
3269373 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 49.0 4.23e-01 74.6% 45.6%
4110879 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.73 53.0 4.07e-01 78.0% 43.0%
3744023 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 53.0 4.09e-01 76.3% 73.6%
3597563 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 55.0 4.30e-01 81.4% 79.2%
4076629 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.73 54.0 3.47e-01 79.7% 21.5%
3231448 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.73 54.0 3.89e-01 79.7% 35.2%
3623467 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 57.0 3.41e-01 86.4% 42.0%
3732987 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 52.0 4.02e-01 79.7% 55.2%
3512614 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 52.0 4.10e-01 79.7% 62.6%
3484503 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 54.0 3.56e-01 84.7% 46.9%
3575645 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 51.0 4.64e-01 79.7% 62.5%
3595376 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 47.0 3.40e-01 76.3% 26.2%
4390303 5.1.3.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.68 54.0 3.10e-01 88.1% 24.2%
3692287 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 57.0 3.34e-01 93.2% 21.0%
3190113 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 57.0 3.61e-01 93.2% 42.3%
4965842 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.67 50.0 3.18e-01 79.7% 38.9%
3250427 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 50.0 4.02e-01 79.7% 66.4%
3478885 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.66 53.0 3.14e-01 88.1% 38.5%
3357629 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 54.0 3.25e-01 89.8% 31.6%
3173930 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 56.0 3.31e-01 96.6% 35.8%
3705295 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 55.0 3.50e-01 93.2% 34.8%
3269508 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 45.0 3.59e-01 71.2% 89.6%
2878219 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.65 54.0 3.27e-01 93.2% 31.3%
3640699 5.1.4.408 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C 0.65 56.0 3.57e-01 100.0% 81.8%
3935619 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 53.0 3.21e-01 93.2% 37.7%
5038796 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.65 45.0 4.06e-01 72.9% 75.0%
3800795 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 54.0 3.21e-01 96.6% 20.6%
4022249 5.1.5.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.63 51.0 3.13e-01 93.2% 29.6%
3903552 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.62 48.0 3.00e-01 86.4% 31.7%
3708680 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.62 42.0 2.92e-01 71.2% 25.5%
5056067 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.62 46.0 2.93e-01 79.7% 34.8%
3717362 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 47.0 2.84e-01 88.1% 28.6%
5012271 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.61 51.0 3.30e-01 100.0% 37.1%
3744093 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 52.0 3.17e-01 100.0% 44.8%
3276359 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 52.0 3.22e-01 98.3% 49.9%
3963365 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.60 47.0 3.04e-01 84.7% 80.6%
4949985 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 41.0 3.76e-01 72.9% 100.0%
3504736 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 40.0 3.10e-01 71.2% 63.6%
4176398 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.59 44.0 2.83e-01 79.7% 38.9%
5053366 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.59 43.0 2.71e-01 79.7% 32.6%
4051669 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.58 41.0 3.53e-01 74.6% 80.0%
4967355 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.58 43.0 4.19e-01 98.3% 70.8%
4378662 3804.1.1.0 alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain 0.58 50.0 3.55e-01 94.9% 68.2%
3961571 3699.1.1.3 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synth 0.57 42.0 3.51e-01 100.0% 41.7%
5063657 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.56 43.0 3.56e-01 88.1% 52.1%
3926363 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 3.56e-01 86.4% 80.0%
3526919 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.55 41.0 3.52e-01 79.7% 52.6%
3802590 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 44.0 2.91e-01 98.3% 49.4%
3294614 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.53 45.0 2.79e-01 96.6% 23.8%
3485027 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 39.0 2.39e-01 100.0% 10.8%
4468976 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.50 41.0 2.72e-01 98.3% 54.8%