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AY328853.1__AAQ96587.1__X__00056

Bact-Vir

AY328853.1__AAQ96587.1__X__00056

Identity

Accession:
AY328853 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_VP16C

TaxID: 238893

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-99
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cjjA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 40.0 4.06e-01 71.0% 84.1%
6b5kB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 39.0 2.62e-01 75.8% 20.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3246073 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.64 53.0 3.38e-01 93.5% 89.7%
3328458 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.58 42.0 4.23e-01 77.4% 90.3%