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AY349011.3__AAQ54949.2__Bcep22_gp15__00014

Bact-Vir

AY349011.3__AAQ54949.2__Bcep22_gp15__00014

Identity

Accession:
AY349011 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-112
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 47.1 1.90e-12 42.1% 93.5%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.86 75.0 7.58e-01 94.4% 92.5%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.65 57.0 4.98e-01 96.3% 87.0%
3igmA00 1.20.5.2050 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.59 26.0 3.41e-01 78.5% 73.2%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586841 378.1.1.7 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 0.85 76.0 7.44e-01 94.4% 96.5%
3965202 378.1.1.19 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.81 70.0 7.01e-01 90.7% 98.2%
3539740 378.1.1.19 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.76 60.0 5.70e-01 83.2% 73.6%
89916 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.65 58.0 5.00e-01 96.3% 87.0%
8233 378.1.1.6 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.65 57.0 4.98e-01 96.3% 87.0%
3695527 378.1.1.6 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon 0.60 53.0 5.08e-01 96.3% 95.8%
3743792 377.1.1.4 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA 0.55 31.0 3.25e-01 100.0% 60.0%
3879653 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.53 28.0 3.32e-01 84.1% 75.7%
3648910 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.52 32.0 3.42e-01 87.9% 72.2%
4539356 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.50 39.0 2.74e-01 85.0% 33.0%
D2 medium residues 117-160
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04218.20 best CENP-B_N 21.3 2.40e-04 72.7% 50.9%
CATH (91)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 80.0 6.86e-01 95.5% 62.1%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 74.0 6.90e-01 86.4% 70.4%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.90 70.0 5.36e-01 84.1% 40.4%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 75.0 7.49e-01 100.0% 88.9%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 70.0 6.46e-01 86.4% 67.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 69.0 6.05e-01 84.1% 60.3%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 73.0 6.95e-01 93.2% 78.4%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 66.0 5.77e-01 81.8% 56.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 64.0 5.94e-01 79.5% 62.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 65.0 5.84e-01 81.8% 60.7%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 65.0 5.64e-01 81.8% 53.7%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 65.0 5.29e-01 81.8% 46.3%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 66.0 6.83e-01 84.1% 92.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 69.0 6.46e-01 88.6% 79.6%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 62.0 5.63e-01 81.8% 58.6%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 63.0 5.18e-01 81.8% 45.0%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 76.0 7.05e-01 100.0% 89.1%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.84 65.0 4.39e-01 84.1% 25.3%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 65.0 6.52e-01 86.4% 88.6%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 62.0 5.44e-01 81.8% 53.7%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 62.0 5.51e-01 81.8% 57.8%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 62.0 5.67e-01 81.8% 62.1%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 5.77e-01 88.6% 59.1%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.83 62.0 3.95e-01 81.8% 17.5%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 5.20e-01 81.8% 50.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 5.26e-01 84.1% 51.4%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 5.54e-01 84.1% 60.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 5.12e-01 81.8% 48.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 61.0 5.43e-01 81.8% 57.1%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.81 72.0 5.11e-01 100.0% 60.3%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.80e-01 81.8% 73.5%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.29e-01 81.8% 58.7%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.79 64.0 4.40e-01 88.6% 71.8%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.91e-01 81.8% 47.4%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.48e-01 77.3% 72.0%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.79 64.0 4.78e-01 90.9% 91.7%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.78 62.0 5.73e-01 88.6% 73.2%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 5.58e-01 84.1% 70.9%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 4.12e-01 84.1% 32.9%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 4.61e-01 81.8% 41.4%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.77 66.0 5.06e-01 97.7% 44.6%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 4.57e-01 84.1% 40.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 4.38e-01 84.1% 39.3%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.80e-01 97.7% 74.1%
5douA01 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.75 65.0 4.36e-01 100.0% 66.7%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.75 57.0 4.07e-01 84.1% 28.2%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.07e-01 84.1% 60.9%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.74 61.0 4.82e-01 95.5% 44.8%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 4.44e-01 84.1% 39.8%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 63.0 5.01e-01 100.0% 50.0%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 4.37e-01 81.8% 40.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 3.88e-01 84.1% 33.8%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 52.0 4.05e-01 75.0% 38.5%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 3.93e-01 81.8% 31.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 4.39e-01 81.8% 42.0%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.51e-01 97.7% 67.2%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 50.0 4.05e-01 72.7% 41.5%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.72 54.0 5.43e-01 86.4% 84.8%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 54.0 4.76e-01 81.8% 58.5%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.68e-01 97.7% 80.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.41e-01 100.0% 64.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 59.0 4.64e-01 100.0% 45.6%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.34e-01 86.4% 40.4%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.26e-01 100.0% 34.2%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 5.29e-01 95.5% 75.0%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.70 52.0 3.63e-01 81.8% 37.5%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 54.0 4.93e-01 88.6% 68.9%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 53.0 5.22e-01 90.9% 91.8%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.69 61.0 5.08e-01 100.0% 57.9%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 47.0 3.89e-01 72.7% 47.4%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.47e-01 81.8% 59.4%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.18e-01 100.0% 40.4%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.06e-01 97.7% 67.2%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.70e-01 97.7% 60.6%
3cjdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 52.0 3.53e-01 90.9% 24.7%
2raeA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 48.0 4.92e-01 81.8% 100.0%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 53.0 4.20e-01 97.7% 50.0%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.66 54.0 3.75e-01 95.5% 54.2%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.10e-01 100.0% 36.0%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 4.61e-01 100.0% 52.4%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 54.0 4.69e-01 97.7% 60.0%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 5.15e-01 100.0% 87.7%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 57.0 4.72e-01 100.0% 59.2%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 3.46e-01 100.0% 26.5%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 44.0 3.01e-01 79.5% 23.7%
1pbwB00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.61 49.0 3.27e-01 93.2% 49.7%
1x1aA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 54.0 3.59e-01 100.0% 24.9%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 47.0 4.18e-01 90.9% 65.7%
4gqmA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 42.0 3.30e-01 77.3% 35.2%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 48.0 4.11e-01 100.0% 54.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.34e-01 81.8% 43.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.99 75.0 7.87e-01 79.5% 87.5%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.99 75.0 6.58e-01 79.5% 58.3%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.97 77.0 8.07e-01 84.1% 92.5%
3476699 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 83.0 6.41e-01 90.9% 47.1%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 79.0 7.90e-01 88.6% 86.7%
5020209 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 83.0 7.15e-01 100.0% 63.1%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 79.0 7.85e-01 88.6% 86.7%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 78.0 7.82e-01 90.9% 86.7%
3589152 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 75.0 7.46e-01 84.1% 82.2%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 80.0 7.99e-01 100.0% 88.9%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.94 78.0 7.17e-01 90.9% 70.9%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 76.0 6.19e-01 86.4% 50.7%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.94 77.0 8.07e-01 90.9% 97.5%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.93 82.0 7.00e-01 93.2% 63.1%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.93 77.0 6.84e-01 88.6% 66.7%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 77.0 7.07e-01 90.9% 70.9%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 81.0 6.96e-01 95.5% 63.1%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 74.0 6.90e-01 86.4% 70.4%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.92 78.0 6.93e-01 90.9% 66.7%
4961899 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.92 75.0 6.44e-01 86.4% 58.5%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 78.0 7.43e-01 90.9% 80.0%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 78.0 8.22e-01 97.7% 100.0%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.92 74.0 6.55e-01 86.4% 63.3%
3281819 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.91 74.0 5.99e-01 90.9% 48.8%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 75.0 6.76e-01 90.9% 66.7%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.91 76.0 6.41e-01 90.9% 58.6%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 76.0 6.41e-01 93.2% 57.1%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.91 77.0 6.27e-01 90.9% 53.3%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 75.0 6.71e-01 90.9% 68.3%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 84.0 7.99e-01 100.0% 90.0%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 77.0 6.91e-01 100.0% 69.5%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 79.0 7.26e-01 95.5% 81.8%
5020331 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 72.0 6.22e-01 86.4% 58.5%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.89 74.0 6.47e-01 90.9% 61.5%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.89 71.0 7.41e-01 86.4% 95.0%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.89 76.0 7.27e-01 93.2% 82.0%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 70.0 7.08e-01 86.4% 86.4%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.89 73.0 7.24e-01 88.6% 86.7%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.89 76.0 5.87e-01 93.2% 45.6%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 6.58e-01 93.2% 63.1%
4238039 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.89 72.0 6.46e-01 90.9% 65.0%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 70.0 6.31e-01 86.4% 63.3%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.89 70.0 6.64e-01 86.4% 73.1%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 7.46e-01 93.2% 91.1%
3501262 101.1.6.18 alpha arrays › HTH › HTH › TrpR › Zn_ribbon_ISL3 0.88 79.0 5.39e-01 100.0% 30.3%
3590401 375.1.1.90 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ISL3 0.88 79.0 5.38e-01 100.0% 30.3%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 77.0 6.89e-01 95.5% 75.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 73.0 6.54e-01 93.2% 66.7%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.88 68.0 7.17e-01 84.1% 97.4%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 72.0 6.32e-01 90.9% 61.5%
3590303 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.88 73.0 6.13e-01 93.2% 54.7%
5017723 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 73.0 6.11e-01 100.0% 54.7%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 78.0 7.12e-01 95.5% 80.0%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 79.0 6.87e-01 100.0% 69.2%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 70.0 6.26e-01 86.4% 63.3%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.87 66.0 6.90e-01 84.1% 92.5%
3589364 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.87 77.0 5.36e-01 100.0% 32.6%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 79.0 7.03e-01 100.0% 75.0%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.87 73.0 6.55e-01 93.2% 68.3%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 75.0 7.19e-01 100.0% 84.0%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 76.0 7.05e-01 100.0% 78.2%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 72.0 6.34e-01 100.0% 63.1%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.86 80.0 7.33e-01 100.0% 92.7%
4973961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 69.0 5.24e-01 86.4% 41.1%
3927372 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 71.0 5.80e-01 100.0% 51.2%
5016985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 73.0 7.29e-01 93.2% 95.6%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 6.27e-01 93.2% 63.1%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.85 69.0 5.35e-01 90.9% 43.2%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 77.0 7.14e-01 100.0% 89.1%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 74.0 5.55e-01 95.5% 43.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 76.0 6.42e-01 100.0% 69.0%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 76.0 6.83e-01 100.0% 81.7%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.84 69.0 6.86e-01 100.0% 88.9%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 63.0 5.86e-01 81.8% 65.5%
3701286 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 71.0 6.80e-01 100.0% 82.0%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 6.80e-01 100.0% 82.0%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.84 65.0 6.77e-01 86.4% 97.5%
3640035 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 67.0 5.41e-01 90.9% 47.1%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 66.0 6.20e-01 90.9% 74.5%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 66.0 6.61e-01 93.2% 88.9%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 69.0 6.61e-01 97.7% 82.0%
3932988 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 70.0 6.54e-01 100.0% 78.2%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.82 74.0 5.30e-01 100.0% 39.2%
5061884 101.1.2.887 alpha arrays › HTH › HTH › winged helix domain › DUF1670 0.81 72.0 4.81e-01 100.0% 40.6%
3964047 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 67.0 4.99e-01 100.0% 37.3%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 60.0 5.34e-01 81.8% 55.4%
3925603 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.70e-01 100.0% 86.0%
3963536 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 66.0 4.89e-01 100.0% 35.7%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.80 67.0 5.34e-01 97.7% 46.7%
3964524 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.80 65.0 4.35e-01 100.0% 23.4%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 67.0 6.29e-01 95.5% 78.2%
3783362 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.80 68.0 3.77e-01 100.0% 7.7%
3963336 2484.1.1.107 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 0.80 65.0 4.14e-01 100.0% 19.1%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 69.0 6.18e-01 95.5% 71.7%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 63.0 5.53e-01 95.5% 58.6%
4939633 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.78 60.0 5.25e-01 81.8% 58.7%
2761 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 58.0 4.61e-01 81.8% 41.4%
3989048 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.76 61.0 4.16e-01 88.6% 35.3%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 58.0 5.12e-01 100.0% 60.0%
4958468 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 60.0 5.45e-01 100.0% 71.7%