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AY349011.3__AAQ54950.2__Bcep22_gp16__00015

Bact-Vir

AY349011.3__AAQ54950.2__Bcep22_gp16__00015

Identity

Accession:
AY349011 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 121-188
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 33.8 2.80e-08 69.1% 89.1%
D2 high residues 196-248
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 61.0 6.08e-01 71.7% 70.4%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 65.0 6.01e-01 79.2% 66.7%
1hcrA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 67.0 6.77e-01 84.9% 82.7%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 64.0 6.91e-01 94.3% 93.3%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 59.0 5.78e-01 71.7% 67.9%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 61.0 5.68e-01 81.1% 62.1%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 61.0 6.21e-01 77.4% 80.4%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.79 57.0 5.61e-01 75.5% 75.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 54.0 5.78e-01 71.7% 90.9%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.79 55.0 3.87e-01 71.7% 26.0%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.77 56.0 4.02e-01 77.4% 72.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 63.0 6.29e-01 90.6% 90.9%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.19e-01 71.7% 73.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 4.98e-01 71.7% 72.0%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.00e-01 71.7% 69.1%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 53.0 3.94e-01 81.1% 74.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.94e-01 71.7% 76.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.70 62.0 4.68e-01 100.0% 42.1%
5douA01 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.70 57.0 3.91e-01 88.7% 65.5%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 50.0 5.19e-01 79.2% 85.7%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 4.68e-01 75.5% 73.8%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 4.87e-01 83.0% 67.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 53.0 4.39e-01 88.7% 47.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 4.76e-01 96.2% 65.7%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.67 45.0 4.75e-01 71.7% 84.8%
1pbwB00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.66 53.0 3.64e-01 92.5% 35.4%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 3.62e-01 81.1% 35.7%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.65 56.0 4.59e-01 100.0% 62.4%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 51.0 4.26e-01 94.3% 53.8%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 3.52e-01 75.5% 33.3%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.64 48.0 4.24e-01 81.1% 57.9%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 47.0 4.34e-01 86.8% 62.9%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 55.0 3.93e-01 100.0% 98.1%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 47.0 3.32e-01 83.0% 26.7%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.10e-01 81.1% 60.6%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 49.0 3.98e-01 88.7% 45.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 48.0 4.24e-01 88.7% 59.2%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 3.78e-01 75.5% 65.0%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.84e-01 81.1% 50.6%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 3.54e-01 86.8% 40.3%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.99e-01 84.9% 94.4%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.23e-01 86.8% 30.5%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 46.0 4.05e-01 96.2% 61.3%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 41.0 3.97e-01 98.1% 72.3%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 3.89e-01 98.1% 74.5%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.55 38.0 3.60e-01 73.6% 70.1%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.85e-01 100.0% 79.8%
4d7kA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.64e-01 100.0% 68.8%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 70.0 6.64e-01 75.5% 68.3%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 68.0 7.34e-01 75.5% 86.7%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.96 71.0 6.77e-01 77.4% 68.3%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 67.0 7.31e-01 75.5% 86.7%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 71.0 7.32e-01 77.4% 82.0%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 65.0 5.70e-01 71.7% 50.7%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.94 66.0 7.58e-01 75.5% 97.5%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.94 63.0 6.81e-01 71.7% 82.2%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.94 69.0 6.38e-01 77.4% 63.1%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.93 69.0 6.61e-01 77.4% 68.3%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.93 69.0 5.97e-01 79.2% 54.7%
3281819 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.92 65.0 5.55e-01 75.5% 48.8%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 64.0 7.29e-01 81.1% 95.0%
4929382 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 63.0 6.27e-01 71.7% 69.1%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 66.0 7.13e-01 83.0% 88.9%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.91 67.0 6.18e-01 77.4% 63.1%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.91 64.0 6.31e-01 75.5% 70.9%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 71.0 6.80e-01 83.0% 73.3%
5020331 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 62.0 5.74e-01 71.7% 58.5%
3590546 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 67.0 6.74e-01 83.0% 77.8%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.90 66.0 6.32e-01 83.0% 68.3%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.89 66.0 6.08e-01 83.0% 63.1%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 63.0 6.73e-01 75.5% 86.7%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 64.0 7.37e-01 81.1% 100.0%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 63.0 6.04e-01 81.1% 66.1%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.89 62.0 6.73e-01 73.6% 86.7%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.89 67.0 6.89e-01 79.2% 84.0%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 64.0 6.85e-01 77.4% 88.9%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 61.0 6.08e-01 71.7% 70.4%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 65.0 6.01e-01 79.2% 63.1%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 62.0 6.13e-01 81.1% 70.9%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 63.0 6.02e-01 81.1% 66.7%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 76.0 7.49e-01 100.0% 89.1%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 61.0 6.33e-01 75.5% 78.0%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 60.0 6.46e-01 71.7% 86.4%
3066183 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 61.0 4.79e-01 81.1% 37.1%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.87 60.0 5.72e-01 71.7% 65.0%
3794969 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 62.0 6.40e-01 77.4% 80.0%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 65.0 6.02e-01 79.2% 67.7%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 59.0 5.69e-01 71.7% 63.3%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.86 59.0 6.38e-01 81.1% 84.4%
4238039 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.86 60.0 5.82e-01 75.5% 65.0%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.86 59.0 5.95e-01 71.7% 73.1%
3597464 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 62.0 5.99e-01 81.1% 68.3%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.85 62.0 5.63e-01 77.4% 60.0%
4967740 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 62.0 6.16e-01 77.4% 74.5%
3204806 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 61.0 6.48e-01 75.5% 88.9%
4973961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 58.0 4.69e-01 71.7% 40.0%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.84 66.0 6.52e-01 100.0% 81.8%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 58.0 4.84e-01 75.5% 43.3%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 75.0 7.20e-01 100.0% 86.7%
3925603 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 58.0 5.93e-01 75.5% 78.0%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 66.0 6.80e-01 96.2% 92.0%
3933546 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 58.0 5.13e-01 75.5% 53.3%
4010213 101.1.1.218 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS1 0.81 64.0 6.54e-01 86.8% 90.0%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.81 63.0 5.55e-01 86.8% 58.7%
3942571 101.1.1.198 alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.80 56.0 5.25e-01 73.6% 69.2%
3977374 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 55.0 5.46e-01 71.7% 72.7%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.80 68.0 5.57e-01 90.6% 56.7%
4964523 101.1.1.538 alpha arrays › HTH › HTH › Three-helical HTH › CPSase_L_D3 0.80 55.0 3.94e-01 71.7% 26.2%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 62.0 5.89e-01 81.1% 71.7%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 63.0 6.53e-01 100.0% 92.0%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 63.0 6.25e-01 90.6% 81.8%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 67.0 6.67e-01 96.2% 87.3%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.79 71.0 6.98e-01 96.2% 90.9%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 68.0 6.75e-01 100.0% 90.9%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 59.0 6.08e-01 86.8% 86.0%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.78 56.0 4.65e-01 77.4% 43.2%
3932988 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 56.0 5.61e-01 86.8% 74.5%
3942922 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.78 66.0 5.85e-01 100.0% 65.3%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.77 66.0 4.98e-01 98.1% 40.8%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 54.0 5.75e-01 75.5% 88.9%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.77 52.0 5.72e-01 71.7% 97.5%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 57.0 5.35e-01 83.0% 66.2%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 57.0 4.85e-01 83.0% 50.6%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.75 62.0 5.69e-01 92.5% 84.3%
4486944 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.74 66.0 4.46e-01 100.0% 28.3%
4965811 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.74 55.0 5.29e-01 81.1% 70.0%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 64.0 5.97e-01 94.3% 76.9%
3986842 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 65.0 5.89e-01 100.0% 94.3%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 53.0 4.92e-01 83.0% 61.4%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.71 63.0 5.68e-01 96.2% 74.6%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.67 59.0 5.17e-01 100.0% 71.2%
3987666 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.50 40.0 3.63e-01 100.0% 77.6%
D3 medium residues 72-114
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d00A02 3.30.60.80 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.70 43.0 4.77e-01 86.0% 86.7%
4uf0A03 2.10.110.20 Mainly Beta › Ribbon › Cysteine Rich Protein › 0.67 56.0 4.85e-01 93.0% 63.1%
5tdrA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.66 50.0 4.30e-01 83.7% 51.4%
5yvxA00 3.30.40.100 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.63 46.0 4.16e-01 79.1% 68.3%
7r0kA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.61 49.0 3.38e-01 95.3% 63.9%
1g2dC03 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 37.0 4.28e-01 88.4% 96.3%
2xguB00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.60 41.0 2.93e-01 72.1% 90.3%
1e29A00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.58 47.0 3.45e-01 100.0% 63.0%
2ma5A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 45.0 4.20e-01 100.0% 72.1%
3vhtB02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 37.0 4.01e-01 95.3% 85.3%
1yuiA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 38.0 3.63e-01 100.0% 59.3%
2rsiA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 35.0 3.89e-01 95.3% 96.6%
4bmjA00 6.20.250.40 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.54 38.0 3.44e-01 95.3% 51.6%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 36.0 3.28e-01 72.1% 95.6%
1wjpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 35.0 3.89e-01 93.0% 90.3%
2epcA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 35.0 3.85e-01 97.7% 90.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3450949 4207.1.2.63 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › DUF1677 0.95 87.0 6.44e-01 100.0% 44.0%
3322252 4952.1.1.3 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › DUF1677 0.92 83.0 6.95e-01 100.0% 62.9%
3438405 386.1.1.310 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1677 0.91 82.0 6.94e-01 100.0% 63.8%
3451619 102.1.1.117 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF1677 0.90 80.0 6.12e-01 100.0% 46.3%
3362601 148.1.3.176 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF1677 0.88 77.0 6.76e-01 100.0% 69.2%
3435613 3014.1.1.3 alpha duplicates or obligate multimers › Middle operon regulator dimerization domain › Middle operon regulator dimerization domain › Middle operon regulator dimerization domain › DUF1677 0.88 76.0 6.60e-01 97.7% 66.2%
3658113 857.1.1.16 a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › DUF1677 0.86 75.0 6.41e-01 100.0% 62.9%
3431630 103.5.1.8 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF1677 0.86 75.0 6.25e-01 100.0% 60.0%
3658922 148.1.3.176 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF1677 0.86 74.0 5.95e-01 100.0% 52.9%
3420417 102.1.1.117 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF1677 0.83 69.0 6.04e-01 95.3% 66.2%
3521800 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 60.0 6.51e-01 81.4% 100.0%
3260588 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.77 61.0 5.88e-01 90.7% 78.0%
3596234 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 50.0 5.14e-01 88.4% 77.5%
3596419 375.1.1.77 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.72 55.0 5.62e-01 88.4% 90.0%
3609284 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 56.0 5.25e-01 90.7% 98.2%
3819953 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 62.0 6.14e-01 97.7% 93.3%
4960712 205.1.1.16 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.71 58.0 3.81e-01 90.7% 32.6%
4031664 375.1.1.75 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2197 0.69 53.0 5.44e-01 83.7% 97.5%
3963491 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 45.0 4.67e-01 88.4% 82.5%
4980605 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 46.0 4.55e-01 81.4% 73.3%
3922026 386.1.1.26 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 0.60 39.0 4.23e-01 100.0% 96.7%
3574820 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.60 38.0 3.58e-01 93.0% 50.9%
3858900 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 39.0 4.30e-01 100.0% 93.3%
2410277 386.1.1.125 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_16 0.59 39.0 4.20e-01 93.0% 96.7%
4001614 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 38.0 4.23e-01 95.3% 93.3%
3480522 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 40.0 3.59e-01 100.0% 47.7%
3493243 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.59 40.0 4.34e-01 97.7% 100.0%
3862602 386.1.1.18 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz 0.59 38.0 3.56e-01 93.0% 50.9%
3550972 386.1.1.26 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 0.59 38.0 4.17e-01 100.0% 96.7%
3359059 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 38.0 3.64e-01 93.0% 56.0%
3710951 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.58 37.0 2.90e-01 90.7% 28.0%
3890764 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.58 39.0 3.12e-01 100.0% 33.3%
None 0.58 38.0 3.52e-01 93.0% 50.9%
3411497 386.1.1.18 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz 0.58 38.0 4.31e-01 90.7% 96.7%
4026266 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.58 45.0 2.84e-01 90.7% 31.7%
4404543 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 37.0 3.89e-01 90.7% 72.5%
3570260 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 37.0 3.40e-01 93.0% 46.7%
3567437 101.1.1.453 alpha arrays › HTH › HTH › Three-helical HTH › zf-met 0.57 38.0 4.13e-01 93.0% 96.7%
3913685 386.1.1.25 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 0.56 37.0 3.81e-01 90.7% 72.5%
3246855 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 39.0 3.09e-01 100.0% 35.6%
3887483 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 36.0 4.01e-01 93.0% 93.3%
3406438 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 36.0 4.06e-01 90.7% 96.7%
3559673 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 36.0 3.96e-01 90.7% 96.7%
4945555 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 35.0 3.71e-01 83.7% 80.0%
3486562 386.1.1.242 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_16 0.54 35.0 3.27e-01 93.0% 48.3%
3918946 386.1.1.312 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met, zf-C2H2_4 0.54 36.0 3.39e-01 93.0% 52.7%
3709973 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 35.0 3.66e-01 72.1% 72.5%
3864004 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.54 36.0 3.41e-01 93.0% 52.7%
3800049 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 35.0 3.76e-01 90.7% 82.9%
3752890 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 36.0 3.58e-01 93.0% 64.4%
3416974 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 37.0 3.45e-01 74.4% 56.4%
3254528 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 35.0 2.91e-01 90.7% 35.0%
3762103 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 36.0 3.76e-01 90.7% 85.7%
3794387 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 37.0 3.90e-01 93.0% 88.6%
3599731 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 36.0 2.41e-01 90.7% 15.8%
3926007 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.53 39.0 2.99e-01 79.1% 41.9%
3774937 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 35.0 3.46e-01 97.7% 64.4%
3623527 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 36.0 3.17e-01 100.0% 45.7%
3348160 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 36.0 3.53e-01 100.0% 68.8%
3235894 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 33.0 3.44e-01 90.7% 70.0%
3233656 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 34.0 3.48e-01 90.7% 72.5%
3402448 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 33.0 3.56e-01 90.7% 96.7%
3626544 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 33.0 3.36e-01 90.7% 68.2%