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AY349011.3__ABW74908.1__Bcep22_gp07__00007

Bact-Vir

AY349011.3__ABW74908.1__Bcep22_gp07__00007

Identity

Accession:
AY349011 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lessievirus› Burkholderia_phage_Bcep22

TaxID: 2883944

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-70
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pe4A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 46.0 2.77e-01 75.0% 77.2%
7pi0S01 1.10.3460.10 Mainly Alpha › Orthogonal Bundle › Chlorophyll a-b binding protein › Chlorophyll a/b binding protein domain 0.60 48.0 3.33e-01 100.0% 26.1%
3ebrA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 44.0 3.29e-01 89.3% 75.6%
5suvC00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.54 44.0 3.40e-01 89.3% 44.8%
5ngyA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.53 40.0 3.35e-01 83.9% 55.8%
4eo3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 40.0 3.05e-01 82.1% 71.7%
2ostD00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 44.0 3.42e-01 96.4% 75.2%
3cjxA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 43.0 3.31e-01 96.4% 78.7%
5bpxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 42.0 3.24e-01 96.4% 76.5%
4gxtA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 40.0 2.82e-01 91.1% 49.8%
2v05A02 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.52 40.0 2.90e-01 85.7% 34.9%
1cdcA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 32.0 2.72e-01 100.0% 34.4%
2vhjA02 2.30.270.20 Mainly Beta › Roll › duf1285 protein fold › 0.51 39.0 3.79e-01 83.9% 80.6%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.51 43.0 4.00e-01 100.0% 94.6%
3irpX01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 2.97e-01 89.3% 73.0%
4lx3A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.50 34.0 2.94e-01 98.2% 40.6%
2xadA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.50 42.0 2.72e-01 92.9% 52.1%
1n67A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.07e-01 91.1% 76.6%
1dymA00 2.70.100.10 Mainly Beta › Distorted Sandwich › 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A › Glycoside hydrolase, family 7, domain 0.50 40.0 2.44e-01 91.1% 25.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974474 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.65 45.0 3.91e-01 96.4% 45.6%
4996620 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 38.0 3.23e-01 96.4% 35.6%
3815764 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.63 36.0 2.82e-01 83.9% 24.8%
4464635 604.12.1.16 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SFXNs 0.60 53.0 3.55e-01 100.0% 47.1%
4053431 375.1.1.37 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon 0.59 37.0 3.72e-01 87.5% 63.6%
3263167 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.57 42.0 3.25e-01 100.0% 32.6%
3290334 282.1.1.0 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.56 47.0 3.51e-01 92.9% 96.4%
3891521 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 42.0 2.69e-01 83.9% 16.1%
3968026 10.12.1.49 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_7 0.54 43.0 3.25e-01 91.1% 76.1%
4975739 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 45.0 2.81e-01 100.0% 39.2%
3799812 2485.1.1.71 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SelP_N 0.53 38.0 3.21e-01 78.6% 90.5%
3722860 2004.1.1.463 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin, Kinesin_assoc, Microtub_bd 0.52 44.0 2.67e-01 100.0% 78.9%
3696633 3393.1.1.2 ↗ extended segments › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › CAA3-type cytochrome c oxidase subunit IV › Kinesin_assoc 0.52 42.0 3.67e-01 96.4% 69.5%
3232211 11.2.1.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.52 40.0 2.78e-01 87.5% 47.6%
3604410 2004.1.1.293 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.52 46.0 3.24e-01 100.0% 31.1%
5054654 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.52 41.0 3.05e-01 85.7% 80.0%
3716107 2484.2.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.52 31.0 2.95e-01 87.5% 50.0%
5028816 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.52 42.0 2.43e-01 91.1% 65.5%
4981710 7604.1.1.0 ↗ a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit 0.52 41.0 3.15e-01 92.9% 52.4%
4802915 702.1.1.4 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack 0.52 39.0 3.65e-01 85.7% 79.7%
4002738 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.51 31.0 3.27e-01 87.5% 68.9%
5009694 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 35.0 2.84e-01 71.4% 84.3%
3449628 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.51 43.0 3.46e-01 94.6% 85.2%
4135591 702.1.1.1 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 0.51 39.0 2.35e-01 83.9% 12.9%
4127375 7516.1.1.5 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD 0.51 41.0 2.75e-01 91.1% 45.8%
4591362 702.1.1.4 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack 0.51 39.0 2.76e-01 85.7% 31.6%
3176266 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 35.0 2.73e-01 75.0% 75.6%
4271349 702.1.1.4 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack 0.50 38.0 2.52e-01 83.9% 21.5%
1280795 10.12.1.49 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_7 0.50 36.0 2.86e-01 82.1% 77.2%
4457120 702.1.1.7 ↗ beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_3 0.50 38.0 3.06e-01 83.9% 51.3%