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AY538772.1__AAS46615.1__X__00001

Bact-Vir

AY538772.1__AAS46615.1__X__00001

Identity

Accession:
AY538772 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Klebsiella_phage_KPP95

TaxID: 264484

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-150
PDB
Domain cluster: rep: AP000422.1__BAA94157.1__X__00060__D14-118
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17289.9 best Terminase_6C 73.7 2.40e-20 100.0% 81.9%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c6aA00 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.98 91.0 8.01e-01 100.0% 71.2%
3bzcA03 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.66 47.0 5.05e-01 97.3% 85.9%
3icoA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 3.62e-01 77.2% 93.0%
7krzA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 22.0 2.86e-01 86.6% 67.9%
1t8tA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 3.24e-01 77.9% 75.7%
2vy9A00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.51 37.0 4.13e-01 100.0% 98.2%
5ntdA02 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 43.0 3.32e-01 91.3% 99.4%
1hlgA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 46.0 3.43e-01 100.0% 90.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
355225 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.98 91.0 8.01e-01 100.0% 71.2%
5002634 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.85 70.0 6.52e-01 94.6% 70.6%
5080207 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.81 72.0 6.40e-01 100.0% 69.0%
5029560 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.56 39.0 3.18e-01 71.1% 75.9%
3287809 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.51 46.0 3.95e-01 100.0% 95.4%
3422969 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.50 34.0 3.71e-01 88.6% 84.9%
3663142 7579.1.1.44 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.50 45.0 3.29e-01 98.7% 88.3%