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AY576796.1__AAT36774.1__X__00026

Bact-Vir

AY576796.1__AAT36774.1__X__00026

Identity

Accession:
AY576796 ↗
Kingdom:
phage

Quality

87.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aspduovirus› Actinoplanes_phage_phiAsp2

TaxID: 279303

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-80
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 50.0 4.04e-01 71.8% 91.5%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 50.0 3.85e-01 78.2% 91.6%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.67 59.0 4.61e-01 100.0% 74.9%
2bhzA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 38.0 3.99e-01 71.8% 63.9%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.63 55.0 4.26e-01 100.0% 78.0%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 46.0 3.62e-01 79.5% 88.8%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 46.0 3.57e-01 79.5% 87.0%
4tpsA00 3.30.310.250 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA 0.62 41.0 3.41e-01 87.2% 37.9%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 46.0 3.67e-01 83.3% 39.9%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 45.0 4.03e-01 83.3% 56.5%
5o7oC01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.58 42.0 3.67e-01 79.5% 48.8%
2m47A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 44.0 3.58e-01 84.6% 76.7%
1qwyA02 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.57 41.0 3.25e-01 75.6% 52.3%
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.57 44.0 3.93e-01 85.9% 56.9%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.77e-01 87.2% 74.6%
2lssA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 32.0 3.38e-01 98.7% 58.6%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 3.47e-01 80.8% 55.0%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 47.0 3.96e-01 100.0% 90.4%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.55 47.0 3.72e-01 100.0% 61.0%
4f2mE00 2.60.40.3130 Mainly Beta › Sandwich › Immunoglobulin-like › Coronavirus S1 glycoprotein, central receptor binding domain (RBD) 0.54 37.0 3.03e-01 70.5% 79.1%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 42.0 3.09e-01 87.2% 52.7%
1u6zA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 42.0 3.71e-01 87.2% 99.2%
1hjrA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 41.0 3.37e-01 87.2% 96.2%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.52 41.0 3.35e-01 84.6% 72.0%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 42.0 3.40e-01 92.3% 67.7%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.52 46.0 3.24e-01 100.0% 89.1%
2y3vD00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.52 41.0 3.29e-01 84.6% 100.0%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.84e-01 98.7% 89.8%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.51 43.0 3.16e-01 97.4% 55.6%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 46.0 3.02e-01 100.0% 53.8%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 39.0 3.45e-01 85.9% 95.2%
2ktsA01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.50 43.0 4.03e-01 98.7% 98.0%
8begA03 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 42.0 3.48e-01 94.9% 100.0%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.50 43.0 3.69e-01 100.0% 80.9%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 42.0 2.79e-01 94.9% 88.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3712989 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.68 61.0 4.43e-01 100.0% 63.8%
3787223 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.66 48.0 2.91e-01 75.6% 30.1%
3499149 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.66 50.0 3.12e-01 80.8% 36.6%
3781478 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.66 53.0 4.81e-01 88.5% 71.4%
3817498 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.66 57.0 4.61e-01 100.0% 91.9%
3743439 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.65 56.0 4.29e-01 96.2% 75.7%
3439605 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.65 56.0 4.18e-01 100.0% 75.3%
4021102 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 51.0 3.12e-01 85.9% 32.3%
3511321 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.64 49.0 2.84e-01 80.8% 20.5%
3168452 331.10.2.3 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.63 49.0 4.49e-01 84.6% 79.0%
3655876 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.62 48.0 2.73e-01 80.8% 17.4%
3600147 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.62 53.0 3.91e-01 100.0% 88.7%
3953943 9.27.1.1 ↗ beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.62 50.0 4.48e-01 88.5% 98.2%
3962450 9.27.1.0 ↗ beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.60 49.0 4.46e-01 88.5% 100.0%
5036807 3111.1.1.0 ↗ beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.60 49.0 4.61e-01 89.7% 91.6%
5010009 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.59 45.0 3.60e-01 84.6% 84.6%
3400196 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.59 45.0 2.82e-01 80.8% 31.9%
5043802 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 53.0 4.61e-01 98.7% 87.8%
3923688 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.58 45.0 2.79e-01 82.1% 23.1%
1503842 9.27.1.1 ↗ beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.58 47.0 4.17e-01 88.5% 100.0%
3456597 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.56 49.0 3.85e-01 98.7% 57.7%
3582979 5.1.4.156 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 0.53 42.0 2.66e-01 87.2% 80.9%
3266335 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 39.0 3.80e-01 80.8% 81.1%
4317535 2484.1.1.41 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.52 40.0 2.75e-01 80.8% 57.6%
3740435 5.1.4.35 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.52 43.0 2.85e-01 92.3% 87.4%
3801015 5.1.4.94 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 0.52 45.0 2.80e-01 98.7% 87.5%
4666231 9.1.1.14 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.52 42.0 3.24e-01 88.5% 74.9%
3742583 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.51 44.0 3.20e-01 100.0% 85.4%
3215469 5.1.4.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1899,WD40_4 0.51 46.0 2.92e-01 100.0% 68.3%
3574041 5.1.13.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › Det1 0.51 45.0 2.77e-01 98.7% 87.6%
D2 high residues 87-142
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 49.0 4.94e-01 75.0% 62.5%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 5.43e-01 85.7% 74.2%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.68 49.0 3.66e-01 100.0% 29.3%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.65e-01 76.8% 68.8%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 4.20e-01 82.1% 56.1%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.65e-01 78.6% 66.2%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.67 51.0 5.13e-01 100.0% 85.7%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 48.0 4.51e-01 85.7% 62.9%
3vibA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 48.0 3.32e-01 78.6% 25.4%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 52.0 5.13e-01 100.0% 82.0%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 53.0 5.40e-01 100.0% 92.6%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 4.87e-01 80.4% 92.6%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 5.09e-01 80.4% 100.0%
3qkxB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 45.0 3.18e-01 75.0% 28.2%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 4.21e-01 76.8% 62.1%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.40e-01 76.8% 68.8%
1iuqA01 1.10.1200.50 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal 0.63 46.0 4.15e-01 76.8% 78.9%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 53.0 4.24e-01 98.2% 84.2%
4bkxA01 4.10.1240.50 Few Secondary Structures › Irregular › Hormone receptor fold › 0.63 44.0 3.52e-01 75.0% 44.2%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.63 53.0 5.11e-01 100.0% 84.1%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.20e-01 78.6% 63.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 3.51e-01 78.6% 38.0%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.62 50.0 4.84e-01 100.0% 79.4%
2g7lA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 47.0 3.25e-01 82.1% 29.9%
3clqA03 1.10.10.660 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › conserved protein of unknown function from Enterococcus faecalis V583 0.62 39.0 3.69e-01 80.4% 50.0%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.83e-01 91.1% 98.2%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 50.0 3.43e-01 91.1% 52.7%
8h4pA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.62 47.0 3.00e-01 83.9% 26.5%
3htaC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 49.0 3.49e-01 91.1% 30.7%
5gp9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 45.0 4.73e-01 78.6% 93.8%
3aqtA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 47.0 3.29e-01 85.7% 27.2%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 3.78e-01 78.6% 48.3%
2o35A00 1.10.3340.10 Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like 0.60 47.0 4.29e-01 91.1% 75.9%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 50.0 3.54e-01 100.0% 71.6%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 3.78e-01 83.9% 94.7%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.56 47.0 3.54e-01 100.0% 57.4%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.68e-01 80.4% 94.0%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 43.0 4.32e-01 91.1% 79.7%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 40.0 4.11e-01 80.4% 87.3%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 44.0 3.35e-01 100.0% 54.0%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.00e-01 89.3% 74.0%
1dulA00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.56 43.0 4.05e-01 83.9% 70.6%
3k1rA01 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.56 42.0 3.77e-01 82.1% 60.5%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.43e-01 94.6% 38.1%
1xwyA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 49.0 3.16e-01 100.0% 31.2%
4oa3A00 3.10.310.50 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.55 41.0 3.13e-01 82.1% 98.6%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.85e-01 82.1% 66.7%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 41.0 3.68e-01 80.4% 70.9%
4i5lB01 1.10.238.230 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.55 42.0 3.58e-01 87.5% 64.0%
4rslA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 2.60e-01 76.8% 78.8%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 3.95e-01 100.0% 63.8%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 45.0 3.15e-01 100.0% 54.1%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002577 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.76 55.0 4.26e-01 87.5% 35.8%
3297365 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.75 53.0 3.73e-01 78.6% 24.9%
3303765 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.75 53.0 3.78e-01 78.6% 26.2%
4056602 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.74 53.0 3.65e-01 78.6% 24.0%
4253265 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.74 53.0 3.70e-01 78.6% 25.5%
4983993 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 53.0 5.25e-01 78.6% 73.3%
3968886 101.1.1.77 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 0.73 51.0 4.91e-01 83.9% 64.6%
5010795 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 4.33e-01 78.6% 45.0%
3999386 101.1.6.21 ↗ alpha arrays › HTH › HTH › TrpR › NPR2 0.69 44.0 3.83e-01 82.1% 42.4%
5048345 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.11e-01 76.8% 45.9%
3929142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.86e-01 83.9% 73.3%
3477992 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.68 55.0 4.96e-01 91.1% 66.3%
5036922 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.68 48.0 3.73e-01 76.8% 33.1%
4963579 183.1.1.1 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.67 47.0 3.65e-01 76.8% 33.3%
5063691 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.67 49.0 4.33e-01 80.4% 54.1%
5031872 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 4.97e-01 83.9% 83.3%
5045927 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.66 51.0 4.22e-01 89.3% 46.8%
4960077 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.65 47.0 4.50e-01 76.8% 67.7%
3283788 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.65 48.0 4.38e-01 78.6% 70.7%
1212365 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.65 47.0 4.57e-01 78.6% 82.8%
3948820 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.65 49.0 4.25e-01 82.1% 54.4%
3707222 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 49.0 4.98e-01 83.9% 85.5%
4007629 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.64 46.0 4.38e-01 80.4% 62.9%
4986964 101.1.2.46 ↗ alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg 0.64 46.0 4.10e-01 78.6% 52.9%
3291136 183.1.1.0 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain 0.64 46.0 3.45e-01 78.6% 29.3%
4076621 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.64 47.0 4.98e-01 80.4% 98.0%
3286793 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.64 53.0 4.07e-01 98.2% 42.1%
3969964 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.63 45.0 3.99e-01 76.8% 51.8%
4954772 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.63 45.0 4.53e-01 78.6% 78.2%
4550123 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.63 48.0 4.71e-01 82.1% 81.7%
4943979 101.1.2.874 ↗ alpha arrays › HTH › HTH › winged helix domain › RIO1 0.63 45.0 4.28e-01 78.6% 65.7%
3419318 101.1.1.10 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ARID 0.63 46.0 3.57e-01 80.4% 63.1%
3942897 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 50.0 4.49e-01 89.3% 65.0%
3664503 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.63 50.0 4.69e-01 96.4% 71.4%
4663875 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.63 46.0 3.08e-01 80.4% 19.6%
5031004 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.63 47.0 4.12e-01 96.4% 54.1%
4653037 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 43.0 3.50e-01 78.6% 35.0%
3980765 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 46.0 3.42e-01 82.1% 28.5%
4086835 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.62 46.0 4.22e-01 82.1% 58.7%
3978748 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.62 44.0 3.91e-01 76.8% 51.8%
3279079 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.62 48.0 4.34e-01 85.7% 68.8%
3826046 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.62 47.0 3.44e-01 83.9% 28.5%
5040366 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 47.0 4.64e-01 85.7% 85.0%
3546741 101.1.1.96 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.62 44.0 3.80e-01 83.9% 45.0%
5040821 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.62 43.0 2.91e-01 96.4% 20.0%
3736803 101.1.1.57 ↗ alpha arrays › HTH › HTH › Three-helical HTH › MRP-L20 0.62 43.0 3.20e-01 83.9% 26.1%
5047003 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.61 42.0 4.04e-01 82.1% 60.0%
4077811 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.61 43.0 4.01e-01 76.8% 84.0%
4659432 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 43.0 4.01e-01 78.6% 57.3%
3662905 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.61 45.0 4.60e-01 82.1% 87.3%
4518420 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.61 45.0 4.38e-01 82.1% 76.9%
4927812 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 42.0 3.89e-01 75.0% 56.0%
4944438 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.60 44.0 3.76e-01 82.1% 47.4%
4391471 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.60 45.0 4.57e-01 82.1% 85.5%
3283805 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.60 47.0 4.41e-01 89.3% 77.1%
4954928 6049.1.1.0 ↗ alpha bundles › PH0832-like › PH0832-like › PH0832-like 0.60 45.0 3.79e-01 82.1% 84.2%
3429968 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.59 44.0 4.14e-01 82.1% 68.6%
3281362 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.59 43.0 4.12e-01 96.4% 67.1%
3962667 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 46.0 4.70e-01 100.0% 92.7%
3288981 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.58 41.0 3.68e-01 78.6% 52.9%
170157 4245.1.1.1 ↗ alpha duplicates or obligate multimers › SMc04008-like › SMc04008-like › SMc04008-like › DUF1244 0.58 45.0 3.89e-01 91.1% 61.2%
4284318 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.57 42.0 3.87e-01 82.1% 60.0%
5067037 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.57 41.0 3.67e-01 76.8% 57.5%
3926999 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.56 39.0 3.55e-01 76.8% 50.6%
3287132 7579.1.1.44 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.56 43.0 2.84e-01 83.9% 25.4%
5050904 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 3.43e-01 100.0% 70.6%
3173132 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 44.0 3.46e-01 100.0% 88.0%