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AY576796.1__AAT36787.1__X__00039

Bact-Vir

AY576796.1__AAT36787.1__X__00039

Identity

Accession:
AY576796 ↗
Kingdom:
phage

Quality

65.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-75
PDB
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.83 69.0 5.23e-01 100.0% 40.5%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.81 65.0 6.04e-01 100.0% 69.9%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.80 64.0 4.81e-01 100.0% 36.4%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 61.0 4.95e-01 100.0% 45.1%
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.69e-01 100.0% 70.8%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 61.0 4.69e-01 100.0% 39.2%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 66.0 6.11e-01 100.0% 94.4%
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.73 63.0 5.74e-01 100.0% 76.9%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.69 59.0 5.40e-01 100.0% 72.2%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.67 57.0 5.38e-01 100.0% 80.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 45.0 4.73e-01 87.7% 76.9%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.67 57.0 4.56e-01 100.0% 62.8%
4aybA05 4.10.320.40 Few Secondary Structures › Irregular › Dihydrolipoamide Transferase › 0.66 44.0 4.86e-01 94.7% 90.9%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 56.0 5.40e-01 100.0% 97.0%
5yc9B01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.64 55.0 4.64e-01 98.2% 68.0%
3lkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 50.0 3.29e-01 96.5% 86.9%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.32e-01 80.7% 66.2%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 41.0 4.01e-01 80.7% 64.5%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.46e-01 80.7% 74.2%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 49.0 4.69e-01 100.0% 76.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 3.40e-01 78.9% 33.3%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.16e-01 80.7% 76.1%
7u37A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.25e-01 78.9% 81.0%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.25e-01 80.7% 68.8%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 3.72e-01 80.7% 46.9%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.94e-01 80.7% 57.9%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.89e-01 80.7% 57.5%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.06e-01 80.7% 67.2%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 4.46e-01 80.7% 77.6%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.36e-01 80.7% 73.0%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.58 37.0 3.91e-01 96.5% 74.0%
4b8vA03 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.57 39.0 4.14e-01 96.5% 83.7%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.94e-01 80.7% 63.9%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.89e-01 80.7% 62.7%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.28e-01 93.0% 72.2%
6tgvA01 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.55 42.0 3.23e-01 93.0% 92.5%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 4.28e-01 93.0% 78.1%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 3.56e-01 98.2% 43.1%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 39.0 3.49e-01 80.7% 54.0%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 48.0 3.60e-01 100.0% 64.5%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.93e-01 98.2% 60.6%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.97e-01 98.2% 62.4%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 47.0 3.98e-01 98.2% 70.0%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.64e-01 80.7% 73.6%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.75e-01 98.2% 68.1%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.55e-01 100.0% 60.0%
3pfiA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.91e-01 93.0% 72.6%
6uf3A00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.51 38.0 2.65e-01 87.7% 75.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 46.0 4.14e-01 100.0% 79.5%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 44.0 3.91e-01 100.0% 66.7%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2967124 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.91 75.0 6.97e-01 100.0% 72.5%
3952885 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 71.0 7.52e-01 98.2% 98.0%
388408 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.82 67.0 5.18e-01 100.0% 42.5%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 61.0 6.44e-01 100.0% 98.0%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.79 62.0 6.27e-01 100.0% 90.9%
1844183 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 62.0 4.76e-01 100.0% 38.6%
3288205 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 61.0 5.47e-01 100.0% 62.5%
3980161 101.1.9.45 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.77 60.0 6.15e-01 98.2% 90.9%
3282573 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 61.0 4.78e-01 100.0% 40.8%
4117084 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 64.0 5.37e-01 100.0% 55.0%
360918 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 61.0 4.85e-01 100.0% 43.6%
3954355 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 60.0 4.84e-01 98.2% 45.5%
3164271 101.1.9.136 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF29765 0.74 64.0 6.20e-01 100.0% 87.7%
3943951 101.1.9.45 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.74 60.0 5.78e-01 100.0% 78.5%
3966276 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 64.0 5.20e-01 100.0% 67.3%
5075145 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 61.0 5.93e-01 100.0% 83.1%
4056248 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 64.0 4.77e-01 98.2% 40.7%
5073620 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 61.0 5.94e-01 100.0% 86.2%
3291393 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.72 64.0 5.09e-01 100.0% 60.0%
3941467 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 64.0 5.73e-01 100.0% 85.0%
3976864 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.72 61.0 5.66e-01 100.0% 74.7%
4008376 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.71 62.0 6.11e-01 98.2% 91.7%
4443612 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 56.0 5.88e-01 98.2% 100.0%
3281073 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 61.0 5.06e-01 100.0% 65.7%
3284505 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.70 62.0 4.92e-01 100.0% 59.1%
3281871 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 61.0 4.80e-01 100.0% 59.2%
3980766 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 59.0 4.82e-01 98.2% 60.9%
364451 101.1.9.22 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_54 0.68 57.0 4.82e-01 100.0% 54.4%
4488952 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.68 58.0 4.75e-01 98.2% 60.9%
None 0.68 59.0 5.59e-01 100.0% 97.1%
4061721 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.68 59.0 4.59e-01 100.0% 52.3%
3957229 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 58.0 5.79e-01 100.0% 93.3%
3946914 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 59.0 4.54e-01 100.0% 52.3%
3274594 101.1.9.30 alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N 0.62 51.0 3.60e-01 100.0% 27.5%
4472807 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.62 53.0 4.68e-01 100.0% 66.3%
3976170 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.62 52.0 4.98e-01 100.0% 82.9%
3948669 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.62 52.0 4.25e-01 98.2% 49.6%
4230774 101.1.9.117 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc 0.61 44.0 3.83e-01 100.0% 48.4%
5037318 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.60 46.0 4.07e-01 80.7% 57.8%
3958868 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.60 48.0 3.07e-01 93.0% 75.0%
4456842 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.59 49.0 4.86e-01 100.0% 85.0%
4210562 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.59 47.0 4.67e-01 96.5% 81.7%
4158216 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.59 48.0 4.73e-01 98.2% 83.3%
3664931 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.59 46.0 4.88e-01 98.2% 100.0%
3325524 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.58 46.0 4.73e-01 100.0% 92.7%
None 0.58 47.0 3.03e-01 96.5% 20.0%
4963272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.15e-01 100.0% 57.0%
3366705 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 48.0 4.60e-01 98.2% 81.5%
5040910 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.56 48.0 4.32e-01 98.2% 75.0%
4968989 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.82e-01 86.0% 60.0%
4940054 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 3.90e-01 93.0% 66.3%
5011621 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.68e-01 80.7% 62.5%
3203041 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.55 44.0 3.85e-01 98.2% 57.0%
5029829 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.23e-01 100.0% 75.9%
4929096 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.54 45.0 3.85e-01 93.0% 56.8%
4958659 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.53 47.0 4.07e-01 100.0% 68.9%
4090108 3016.1.1.5 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SHMT 0.53 41.0 2.51e-01 93.0% 18.4%
4927802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 47.0 3.43e-01 100.0% 36.3%
3670673 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.52 42.0 3.60e-01 100.0% 55.5%
5031727 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.52 45.0 3.88e-01 100.0% 71.6%
3650619 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.52 35.0 3.12e-01 73.7% 47.1%
3404575 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.52 39.0 3.52e-01 87.7% 58.9%
4981887 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 3.74e-01 100.0% 58.1%
4971669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 3.41e-01 100.0% 48.3%
3662216 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 2.78e-01 100.0% 25.3%
5012277 101.1.2.904 alpha arrays › HTH › HTH › winged helix domain › HTH_38 0.51 46.0 4.19e-01 100.0% 77.3%
3645708 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.50 42.0 3.47e-01 100.0% 56.5%