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AY576796.1__AAT36806.1__X__00058

Bact-Vir

AY576796.1__AAT36806.1__X__00058

Identity

Accession:
AY576796 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 87-179
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 48.0 6.02e-01 100.0% 94.8%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.82 51.0 4.50e-01 100.0% 45.3%
4modA00 1.20.5.300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.79 45.0 5.02e-01 100.0% 71.1%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.78 57.0 5.64e-01 100.0% 72.2%
6sjqA00 3.10.20.650 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.77 29.0 2.68e-01 88.2% 28.7%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 55.0 5.35e-01 100.0% 67.6%
1rfyB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.74 55.0 5.71e-01 98.9% 80.7%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.70 57.0 5.26e-01 100.0% 69.3%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.70 58.0 5.41e-01 100.0% 71.3%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.70 54.0 5.86e-01 100.0% 98.7%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 48.0 5.18e-01 100.0% 86.1%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.66 45.0 4.23e-01 97.8% 56.4%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 52.0 3.85e-01 100.0% 33.1%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 51.0 5.11e-01 100.0% 80.9%
7wu7601 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 56.0 5.47e-01 100.0% 86.0%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 60.0 4.57e-01 100.0% 70.6%
3v4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 32.0 2.38e-01 100.0% 17.9%
4cgkA01 6.10.250.3150 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 58.0 4.33e-01 100.0% 42.1%
4d8mA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.63 49.0 3.69e-01 98.9% 35.2%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.63 47.0 5.11e-01 95.7% 97.3%
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 59.0 4.58e-01 100.0% 70.2%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 47.0 5.04e-01 100.0% 98.7%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 58.0 5.54e-01 100.0% 98.1%
8i3jA01 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.62 58.0 4.14e-01 100.0% 98.4%
2uuiA00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.62 43.0 3.69e-01 98.9% 43.9%
1l8dA00 1.10.287.510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.61 58.0 5.58e-01 100.0% 98.1%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 57.0 5.36e-01 100.0% 95.4%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 56.0 4.58e-01 98.9% 79.5%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.61 49.0 4.44e-01 100.0% 64.8%
3ajwA00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 56.0 4.90e-01 98.9% 84.3%
2oyhA00 1.20.5.50 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.59 39.0 4.60e-01 90.3% 100.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.59 53.0 4.32e-01 98.9% 92.9%
2zw3A00 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.59 52.0 4.00e-01 97.8% 44.3%
3nb0B03 6.10.260.10 Special › Helix non-globular › F1FO ATP Synthase › 0.58 47.0 4.91e-01 98.9% 94.0%
7wu7501 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 50.0 4.55e-01 100.0% 88.1%
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.56 50.0 3.82e-01 100.0% 45.1%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 34.0 3.09e-01 84.9% 49.6%
6z0wA01 3.40.1690.10 Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU 0.53 25.0 2.39e-01 95.7% 34.2%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.52 41.0 3.34e-01 83.9% 72.2%
2hkvA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 47.0 4.07e-01 97.8% 77.3%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.50 45.0 4.42e-01 100.0% 93.9%
3t7yA00 3.40.1690.10 Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU 0.50 24.0 2.43e-01 73.1% 41.5%
1qhbA00 1.10.606.10 Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 0.50 42.0 2.54e-01 90.3% 91.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4977598 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.74 58.0 5.43e-01 100.0% 69.1%
3927319 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.69 52.0 5.06e-01 100.0% 72.0%
3717131 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.67 59.0 4.58e-01 100.0% 46.5%
3930773 633.23.1.17 alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA 0.66 58.0 4.20e-01 98.9% 87.0%
3172861 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.65 59.0 4.71e-01 100.0% 52.4%
3202986 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 58.0 5.23e-01 100.0% 72.0%
3709459 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.64 58.0 4.36e-01 100.0% 97.7%
4938398 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 59.0 4.99e-01 100.0% 78.6%
3707539 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.63 60.0 4.21e-01 100.0% 37.6%
5000789 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 59.0 5.64e-01 100.0% 88.6%
4661346 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 58.0 4.93e-01 100.0% 78.6%
3741919 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 58.0 5.67e-01 100.0% 93.0%
5070218 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 58.0 5.30e-01 100.0% 95.0%
3691694 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 58.0 5.21e-01 100.0% 77.6%
3932006 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 57.0 5.30e-01 98.9% 98.3%
3599603 3755.2.1.0 alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein 0.62 58.0 4.80e-01 100.0% 60.0%
5056505 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 57.0 5.31e-01 100.0% 99.1%
3786162 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 59.0 5.85e-01 100.0% 97.9%
4532543 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 57.0 4.88e-01 97.8% 100.0%
5079691 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 58.0 5.01e-01 100.0% 94.8%
3785619 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 57.0 5.28e-01 100.0% 80.9%
3483938 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.62 58.0 4.39e-01 100.0% 48.0%
3896368 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 57.0 4.80e-01 100.0% 77.0%
4463557 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 56.0 5.58e-01 100.0% 97.9%
4025349 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.61 56.0 5.00e-01 100.0% 71.5%
4967223 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 57.0 4.95e-01 100.0% 96.2%
5038348 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 57.0 4.86e-01 100.0% 71.4%
4494181 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 57.0 4.79e-01 100.0% 69.0%
3491256 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 57.0 4.48e-01 100.0% 57.1%
3398317 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 57.0 4.61e-01 100.0% 62.5%
3234426 174.1.1.14 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN 0.60 55.0 4.54e-01 100.0% 65.6%
4934732 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 56.0 5.09e-01 100.0% 83.3%
4969864 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 56.0 4.95e-01 100.0% 76.9%
5079975 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 56.0 4.73e-01 100.0% 69.0%
5008906 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 4.70e-01 100.0% 69.0%
4993906 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 4.75e-01 100.0% 71.4%
4283629 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 4.87e-01 100.0% 76.9%
5040546 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 4.57e-01 100.0% 65.4%
4973468 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 4.74e-01 100.0% 71.4%
4303742 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 5.00e-01 100.0% 83.3%
5022380 3755.3.1.632 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin 0.59 55.0 4.72e-01 100.0% 71.4%
4469857 3747.1.1.2 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C 0.59 55.0 5.04e-01 98.9% 96.5%
4994900 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 55.0 4.92e-01 100.0% 80.0%
3908488 633.23.1.35 alpha bundles › Bromodomain-like › Claudin › Claudin › Clarin-2 0.59 51.0 3.95e-01 98.9% 96.4%
3970727 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 53.0 4.68e-01 100.0% 71.1%
4626792 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 55.0 4.63e-01 100.0% 69.0%
3852419 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.58 54.0 4.15e-01 100.0% 46.5%
3728953 3926.1.1.2 alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › Vma22_CCDC115 0.58 53.0 4.56e-01 100.0% 65.0%
4281419 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 53.0 4.61e-01 100.0% 72.5%
5064664 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 51.0 4.71e-01 98.9% 100.0%
4941487 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 51.0 4.70e-01 100.0% 89.2%
5027984 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 52.0 4.72e-01 100.0% 83.3%
3390284 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.56 50.0 4.28e-01 100.0% 70.6%
3340649 3926.1.1.0 alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D 0.56 53.0 4.40e-01 100.0% 65.3%
3630540 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.55 40.0 2.88e-01 78.5% 26.8%
4118829 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 49.0 4.29e-01 100.0% 94.3%
3251557 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 45.0 4.44e-01 100.0% 83.0%
3766090 633.7.1.5 alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like › Piezo_TM1-24 0.54 49.0 4.11e-01 100.0% 93.5%
3599620 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 47.0 4.47e-01 98.9% 93.0%
5066236 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 47.0 4.09e-01 100.0% 91.0%
5030570 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 45.0 3.86e-01 98.9% 100.0%
3538350 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.53 48.0 4.22e-01 100.0% 68.9%
5032062 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 45.0 3.68e-01 100.0% 51.1%
D2 high residues 181-230
PDB
Domain cluster: representative
D3 medium residues 1-86
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3687876 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.55 43.0 3.93e-01 83.7% 94.8%