←Back to structures
AY576796.1__AAT36814.1__X__00066
Bact-VirAY576796.1__AAT36814.1__X__00066
Identity
- Accession:
- AY576796 ↗
- Kingdom:
- phage
Quality
78.4
mean pLDDT
Taxonomy
TaxID: 279303
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-154
Domain cluster:
rep: NC_031253.1__YP_009303249.1__KCH39_gp075__00101__D41-134
D2
high
residues 168-230
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 23.5 | 7.30e-05 | 71.4% | 61.4% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.93 | 85.0 | 7.56e-01 | 100.0% | 71.8% |
| 3bkhA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.91 | 83.0 | 7.37e-01 | 100.0% | 70.9% |
| 4g54A02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.88 | 80.0 | 7.63e-01 | 100.0% | 84.7% |
| 1lbuA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.83 | 77.0 | 6.93e-01 | 100.0% | 75.0% |
| 7aj9A01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.76 | 66.0 | 6.50e-01 | 96.8% | 92.5% |
| 2xd3A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 41.0 | 2.90e-01 | 71.4% | 70.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1165079 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.94 | 86.0 | 7.29e-01 | 100.0% | 63.5% |
| 3291401 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.92 | 85.0 | 7.51e-01 | 100.0% | 71.8% |
| 3959835 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.91 | 81.0 | 7.76e-01 | 96.8% | 84.3% |
| 4032027 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.91 | 82.0 | 7.32e-01 | 100.0% | 71.8% |
| 4218606 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.91 | 84.0 | 7.51e-01 | 100.0% | 74.7% |
| 2859574 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.91 | 79.0 | 7.60e-01 | 100.0% | 83.1% |
| 4117418 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 77.0 | 7.87e-01 | 93.7% | 95.0% |
| 4173379 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 83.0 | 7.55e-01 | 100.0% | 78.8% |
| 224034 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 80.0 | 7.27e-01 | 100.0% | 75.3% |
| 3589440 | 144.1.1.7 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PF30262 | 0.88 | 81.0 | 6.06e-01 | 98.4% | 44.3% |
| 3356981 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 82.0 | 7.46e-01 | 100.0% | 80.0% |
| 3590520 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 81.0 | 7.40e-01 | 100.0% | 80.0% |
| 5019285 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 81.0 | 6.96e-01 | 100.0% | 66.3% |
| 4312892 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.87 | 75.0 | 7.75e-01 | 96.8% | 96.7% |
| 3274761 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.87 | 81.0 | 5.81e-01 | 100.0% | 66.7% |
| 3263339 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.86 | 80.0 | 7.46e-01 | 100.0% | 84.0% |
| 1877329 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.85 | 75.0 | 7.00e-01 | 98.4% | 78.9% |
| 4055540 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 71.0 | 6.90e-01 | 98.4% | 87.0% |
| 4962391 | 144.1.1.11 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_2 | 0.79 | 70.0 | 6.14e-01 | 95.2% | 76.7% |
| 3299326 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.79 | 70.0 | 6.97e-01 | 96.8% | 93.8% |
| 3060287 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.75 | 64.0 | 6.07e-01 | 98.4% | 81.3% |
| 4945529 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.74 | 65.0 | 6.49e-01 | 98.4% | 98.5% |