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AY682195.1__AAV35825.1__orf5__00005

Bact-Vir

AY682195.1__AAV35825.1__orf5__00005

Identity

Accession:
AY682195 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
D2 high residues 66-116
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kxqA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.72 43.0 4.90e-01 92.2% 100.0%
2jxwA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.70 46.0 4.10e-01 90.2% 46.7%
2dk1A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.70 46.0 4.69e-01 90.2% 70.0%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 58.0 3.46e-01 94.1% 22.3%
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.69 41.0 4.72e-01 90.2% 90.9%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 57.0 3.48e-01 92.2% 22.8%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 58.0 5.06e-01 92.2% 80.0%
1nunA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.69 59.0 4.36e-01 100.0% 92.1%
3jb9K01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 56.0 3.48e-01 92.2% 23.1%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.68 50.0 3.67e-01 76.5% 63.4%
8badA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.68 57.0 4.26e-01 100.0% 97.2%
4lg8A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 56.0 3.45e-01 92.2% 22.3%
7fjlA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.67 55.0 4.06e-01 92.2% 67.9%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 57.0 4.26e-01 100.0% 48.9%
5cq2A02 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.67 43.0 4.65e-01 90.2% 79.1%
2ymsB00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 56.0 4.99e-01 94.1% 85.1%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.67 51.0 4.67e-01 86.3% 71.8%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 56.0 3.44e-01 94.1% 21.6%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 55.0 3.39e-01 94.1% 22.7%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.65 56.0 3.47e-01 100.0% 32.4%
2p39A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 53.0 4.00e-01 100.0% 87.3%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.64 52.0 3.78e-01 96.1% 62.9%
3ow8C00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 54.0 3.38e-01 100.0% 28.7%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.62 46.0 4.13e-01 100.0% 57.5%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 53.0 3.64e-01 100.0% 45.5%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 50.0 3.45e-01 100.0% 33.8%
3f2kB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 47.0 3.29e-01 88.2% 44.3%
4kzsA03 3.30.160.710 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 47.0 4.01e-01 94.1% 89.7%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 54.0 4.66e-01 100.0% 69.6%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 50.0 4.13e-01 100.0% 60.2%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 3.75e-01 96.1% 83.7%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 48.0 2.95e-01 94.1% 13.9%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 50.0 3.19e-01 98.0% 37.3%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 49.0 5.12e-01 96.1% 100.0%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 49.0 4.60e-01 96.1% 83.3%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.59 49.0 4.21e-01 100.0% 90.0%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.58 43.0 3.32e-01 84.3% 86.9%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 44.0 3.41e-01 100.0% 34.6%
2e7zA01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.58 41.0 4.03e-01 78.4% 93.0%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 47.0 3.78e-01 90.2% 93.9%
3k1lA02 3.30.457.30 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.57 47.0 4.00e-01 96.1% 76.7%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.57 46.0 4.54e-01 88.2% 89.1%
3vywA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 40.0 2.66e-01 78.4% 49.4%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.55 41.0 3.01e-01 84.3% 89.6%
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.55 47.0 4.29e-01 100.0% 91.4%
2n6eA00 3.40.1530.20 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) 0.55 42.0 3.59e-01 100.0% 61.8%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 43.0 2.85e-01 94.1% 78.9%
3ne5B01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.54 46.0 3.85e-01 96.1% 75.6%
7o06C01 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.54 44.0 3.71e-01 94.1% 84.6%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 2.62e-01 100.0% 23.9%
4b9dB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 43.0 3.62e-01 94.1% 76.3%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.45e-01 100.0% 63.6%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.29e-01 84.3% 62.8%
3ednA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.50 40.0 3.17e-01 100.0% 90.3%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3280222 9.4.1.5 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DUF7586 0.76 67.0 5.64e-01 100.0% 89.4%
3409554 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.75 67.0 5.43e-01 100.0% 92.6%
4016706 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.75 64.0 3.80e-01 94.1% 21.1%
3845291 220.1.1.119 beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.75 66.0 4.25e-01 100.0% 29.4%
5054991 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.75 62.0 4.01e-01 92.2% 32.7%
3908594 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.74 60.0 3.59e-01 88.2% 36.5%
3874056 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.74 54.0 5.26e-01 94.1% 70.9%
3896169 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.74 61.0 3.69e-01 92.2% 20.6%
3770806 220.1.1.119 beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.74 65.0 4.96e-01 100.0% 58.5%
3411374 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 61.0 3.50e-01 94.1% 21.5%
5079458 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.72 60.0 3.55e-01 92.2% 20.8%
3236050 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.72 60.0 4.69e-01 94.1% 60.0%
3718643 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 62.0 4.57e-01 100.0% 66.4%
3217609 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.71 48.0 5.17e-01 98.0% 83.7%
3167728 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.71 60.0 3.66e-01 94.1% 22.9%
3939443 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.71 58.0 4.61e-01 94.1% 51.8%
3793797 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.71 59.0 3.62e-01 94.1% 22.2%
3637063 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.70 59.0 3.75e-01 94.1% 28.2%
4381762 558.1.1.26 alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › WD40 0.70 58.0 3.34e-01 94.1% 15.6%
3543794 6.1.1.1 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF 0.70 60.0 4.23e-01 100.0% 74.5%
3884512 5.1.5.182 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Lgl_C 0.70 58.0 3.40e-01 94.1% 17.6%
4341865 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.70 52.0 5.16e-01 82.4% 76.4%
3316054 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 59.0 3.45e-01 94.1% 24.0%
4946165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.36e-01 100.0% 80.0%
3750824 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.69 58.0 3.51e-01 92.2% 19.8%
3251013 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 57.0 3.44e-01 94.1% 19.7%
3221443 5.1.4.61 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N 0.68 56.0 3.40e-01 92.2% 20.9%
5033075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.09e-01 100.0% 78.2%
4952887 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.09e-01 100.0% 78.2%
3798068 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 56.0 3.68e-01 96.1% 31.6%
3622284 3075.1.1.0 a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA 0.67 55.0 3.24e-01 96.1% 16.4%
3924546 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.66 55.0 4.15e-01 96.1% 47.7%
4579655 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.66 55.0 3.24e-01 94.1% 17.1%
3992587 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 54.0 3.04e-01 100.0% 8.0%
3362766 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.65 45.0 4.57e-01 92.2% 76.0%
4348606 4.1.1.440 beta barrels › SH3 › SH3 › SH3 › PF27165 0.64 54.0 5.09e-01 100.0% 78.5%
5079725 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 50.0 4.77e-01 88.2% 81.7%
3347504 4.2.1.4 beta barrels › SH3 › SAND › SAND › TDBD 0.64 56.0 5.04e-01 100.0% 75.7%
3656952 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 49.0 3.89e-01 90.2% 39.1%
3624687 64.1.1.9 beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 0.63 46.0 4.73e-01 100.0% 82.0%
3300456 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.63 50.0 4.16e-01 94.1% 88.0%
3253837 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.28e-01 100.0% 27.6%
3907533 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.62 42.0 4.52e-01 70.6% 95.0%
3212890 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 52.0 3.39e-01 100.0% 21.7%
3377637 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 56.0 3.49e-01 100.0% 43.7%
4950216 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.62 46.0 4.69e-01 86.3% 87.5%
1396826 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.62 49.0 4.54e-01 90.2% 83.6%
3716426 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.62 53.0 3.87e-01 100.0% 65.5%
3333684 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 50.0 4.65e-01 92.2% 92.3%
4026161 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 47.0 3.48e-01 84.3% 80.8%
3358147 220.1.1.241 beta barrels › PH domain-like › PH domain-like › PH domain-like › EPL1 0.59 47.0 3.18e-01 100.0% 32.4%
4033828 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.59 46.0 4.78e-01 96.1% 100.0%
5012193 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 3.24e-01 100.0% 45.2%
3484214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 41.0 2.93e-01 84.3% 62.5%
4025577 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.53 41.0 2.85e-01 88.2% 58.4%
3413714 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.50 41.0 2.69e-01 90.2% 49.5%
D3 high residues 129-176
PDB