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AY795968.1__AAX21422.1__X__00001
Bact-VirAY795968.1__AAX21422.1__X__00001
Identity
- Accession:
- AY795968 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Taxonomy
TaxID: 45441
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-50
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10834.15 best | DUF2560 | 66.1 | 3.70e-18 | 96.0% | 66.7% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5w79A01 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.76 | 54.0 | 4.84e-01 | 76.0% | 54.3% |
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.75 | 62.0 | 5.51e-01 | 96.0% | 90.7% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 4.41e-01 | 82.0% | 58.1% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.71 | 51.0 | 4.74e-01 | 78.0% | 70.3% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 60.0 | 4.98e-01 | 100.0% | 90.2% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.69 | 43.0 | 3.29e-01 | 78.0% | 29.4% |
| 2l37A00 | 6.10.250.890 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 45.0 | 4.74e-01 | 70.0% | 81.4% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.65 | 55.0 | 4.56e-01 | 100.0% | 91.8% |
| 3j27B00 | 1.10.8.970 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Flavivirus envelope glycoprotein M-like | 0.65 | 49.0 | 4.40e-01 | 82.0% | 61.1% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 48.0 | 4.68e-01 | 82.0% | 76.8% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 46.0 | 4.26e-01 | 82.0% | 98.6% |
| 1dmhA00 | 2.60.130.10 | Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase | 0.62 | 46.0 | 2.85e-01 | 80.0% | 13.9% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.62 | 47.0 | 3.84e-01 | 82.0% | 45.7% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 44.0 | 3.01e-01 | 82.0% | 19.3% |
| 4s3mB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 46.0 | 3.68e-01 | 82.0% | 42.5% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 45.0 | 3.50e-01 | 84.0% | 35.0% |
| 1lwbA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.61 | 52.0 | 3.98e-01 | 100.0% | 47.5% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.60 | 47.0 | 3.81e-01 | 88.0% | 45.3% |
| 1xjaB00 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.60 | 52.0 | 3.72e-01 | 100.0% | 97.4% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 51.0 | 3.44e-01 | 100.0% | 47.6% |
| 6epyA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.56 | 48.0 | 3.05e-01 | 98.0% | 53.5% |
| 1uiuA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.55 | 47.0 | 3.10e-01 | 98.0% | 56.6% |
| 1kxpD04 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 44.0 | 3.97e-01 | 100.0% | 79.2% |
| 1ll1A01 | 1.20.1370.10 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain | 0.54 | 43.0 | 3.53e-01 | 90.0% | 69.7% |
| 2zcaA00 | 1.10.520.40 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › CRISPR-associated protein Cse2 | 0.53 | 37.0 | 2.84e-01 | 96.0% | 26.5% |
| 2qvwB05 | 1.10.1740.150 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.52 | 45.0 | 4.02e-01 | 100.0% | 77.6% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 44.0 | 3.29e-01 | 96.0% | 54.6% |
| 3e0zA00 | 1.20.58.1400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Domain of unknown function DUF3837 | 0.51 | 41.0 | 3.25e-01 | 90.0% | 86.9% |
| 3wkyB01 | 1.20.1370.10 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain | 0.51 | 39.0 | 3.11e-01 | 90.0% | 79.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4571283 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.83 | 65.0 | 5.92e-01 | 88.0% | 64.6% |
| 3591291 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.83 | 63.0 | 4.14e-01 | 82.0% | 22.6% |
| 3201627 | 2003.4.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › THR4_C | 0.83 | 64.0 | 3.90e-01 | 84.0% | 37.6% |
| 3508963 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.79 | 67.0 | 5.29e-01 | 94.0% | 90.0% |
| 3451237 | 397.7.1.2 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › Antimicrobial21 | 0.78 | 55.0 | 5.73e-01 | 78.0% | 82.2% |
| 3242655 | 7023.1.1.0 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein | 0.75 | 52.0 | 4.01e-01 | 72.0% | 36.2% |
| 3213576 | 1145.1.1.0 ↗ | few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 | 0.74 | 49.0 | 5.54e-01 | 70.0% | 97.1% |
| 3594394 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.74 | 55.0 | 4.66e-01 | 82.0% | 89.4% |
| 3701783 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.72 | 54.0 | 4.54e-01 | 82.0% | 89.4% |
| 5052614 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.72 | 64.0 | 4.91e-01 | 100.0% | 91.8% |
| 3998578 | 142.1.1.41 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › RabGAP-TBC | 0.70 | 59.0 | 5.51e-01 | 98.0% | 93.8% |
| 5036290 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.70 | 60.0 | 5.85e-01 | 98.0% | 98.2% |
| 4053440 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.69 | 44.0 | 3.91e-01 | 78.0% | 42.7% |
| 5018474 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 59.0 | 4.61e-01 | 100.0% | 59.1% |
| 3331967 | 397.7.1.3 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › DUF842 | 0.67 | 49.0 | 4.94e-01 | 78.0% | 84.0% |
| 5046176 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.67 | 49.0 | 4.59e-01 | 86.0% | 61.5% |
| 4992571 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 55.0 | 4.66e-01 | 100.0% | 56.5% |
| 3405917 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.63 | 52.0 | 4.03e-01 | 96.0% | 59.0% |
| 2006851 | 1145.1.1.0 ↗ | few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 | 0.63 | 44.0 | 4.66e-01 | 76.0% | 100.0% |
| 3599211 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 51.0 | 3.90e-01 | 98.0% | 86.7% |
| 3552184 | 1045.1.1.1 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Mre11_DNA_bind | 0.61 | 48.0 | 4.03e-01 | 98.0% | 96.2% |
| 3402099 | 5043.2.1.5 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › ATP_synt_H | 0.60 | 45.0 | 3.98e-01 | 82.0% | 54.7% |
| 4446039 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.60 | 47.0 | 4.10e-01 | 82.0% | 61.4% |
| 3412881 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 50.0 | 4.32e-01 | 96.0% | 87.5% |
| 3393832 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.57 | 42.0 | 3.21e-01 | 78.0% | 34.8% |
| 3538309 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.54 | 48.0 | 4.11e-01 | 100.0% | 86.3% |
| 5052463 | 3273.1.1.0 ↗ | alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins | 0.53 | 41.0 | 3.69e-01 | 96.0% | 62.5% |
| 1385366 | 151.1.1.1 ↗ | alpha bundles › Hemocyanin-N › Hemocyanin-N › Hemocyanin-N › Hemocyanin_N | 0.51 | 39.0 | 3.11e-01 | 90.0% | 78.5% |