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AY855346.1__AAZ32271.1__X__00024
Bact-VirAY855346.1__AAZ32271.1__X__00024
Identity
- Accession:
- AY855346 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Taxonomy
TaxID: 2883936
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-135
Domain cluster:
rep: OP753453.1__WAB24442.1__X__00067__D80-189
D2
high
residues 138-192
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00877.26 best | NLPC_P60 | 42.5 | 7.50e-11 | 70.9% | 36.2% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.97 | 87.0 | 6.45e-01 | 94.5% | 43.0% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.96 | 88.0 | 6.42e-01 | 96.4% | 42.1% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.94 | 88.0 | 6.38e-01 | 100.0% | 41.8% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.93 | 85.0 | 6.03e-01 | 98.2% | 37.8% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.92 | 86.0 | 6.24e-01 | 100.0% | 50.4% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.86 | 76.0 | 5.18e-01 | 100.0% | 30.4% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.83 | 73.0 | 5.51e-01 | 98.2% | 43.4% |
| 2im9A01 | 1.10.3670.10 | Mainly Alpha › Orthogonal Bundle › Putative xylanase fold › Putative xylanase like domain | 0.82 | 71.0 | 5.42e-01 | 92.7% | 73.3% |
| 3kw0A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.81 | 73.0 | 4.97e-01 | 100.0% | 38.1% |
| 2a7oA00 | 1.10.1740.100 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain | 0.70 | 52.0 | 4.27e-01 | 81.8% | 44.0% |
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.66 | 52.0 | 3.77e-01 | 94.5% | 84.3% |
| 2p1gA01 | 1.10.3670.10 | Mainly Alpha › Orthogonal Bundle › Putative xylanase fold › Putative xylanase like domain | 0.63 | 50.0 | 3.96e-01 | 92.7% | 66.7% |
| 1kgqA01 | 1.10.166.10 | Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain | 0.62 | 33.0 | 3.13e-01 | 72.7% | 38.6% |
| 2ganA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 3.01e-01 | 80.0% | 34.0% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.54 | 40.0 | 3.50e-01 | 81.8% | 95.3% |
| 4qarA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.53 | 40.0 | 2.74e-01 | 80.0% | 95.4% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.53 | 43.0 | 3.82e-01 | 100.0% | 89.9% |
| 3dl1A01 | 1.10.472.150 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Glucose-regulated metallo-peptidase M90, N-terminal domain | 0.53 | 44.0 | 3.74e-01 | 100.0% | 83.8% |
| 3f6tA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 39.0 | 2.64e-01 | 81.8% | 52.7% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278116 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.97 | 84.0 | 6.35e-01 | 90.9% | 43.5% |
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.97 | 87.0 | 6.50e-01 | 94.5% | 44.1% |
| 4476649 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.97 | 90.0 | 6.47e-01 | 98.2% | 40.7% |
| 4078132 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.96 | 87.0 | 6.38e-01 | 96.4% | 41.4% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.95 | 90.0 | 6.64e-01 | 100.0% | 44.8% |
| 2410168 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.95 | 90.0 | 6.53e-01 | 100.0% | 41.7% |
| 3076246 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.95 | 88.0 | 6.65e-01 | 98.2% | 47.8% |
| 3971907 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.95 | 89.0 | 6.42e-01 | 100.0% | 41.5% |
| 154189 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.94 | 85.0 | 6.30e-01 | 96.4% | 43.5% |
| 3287024 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.94 | 87.0 | 6.33e-01 | 98.2% | 41.5% |
| 3284393 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.93 | 86.0 | 6.33e-01 | 100.0% | 44.2% |
| 161350 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.92 | 85.0 | 5.99e-01 | 98.2% | 37.6% |
| 4373825 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.91 | 82.0 | 6.11e-01 | 96.4% | 42.7% |
| 4169712 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 82.0 | 6.10e-01 | 100.0% | 97.6% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.88 | 81.0 | 5.83e-01 | 100.0% | 39.6% |
| 4477674 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.87 | 79.0 | 5.53e-01 | 100.0% | 76.4% |
| 4935667 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.87 | 80.0 | 5.45e-01 | 100.0% | 91.4% |
| 5013047 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.87 | 79.0 | 5.48e-01 | 100.0% | 86.4% |
| 3278461 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.87 | 79.0 | 5.45e-01 | 100.0% | 82.9% |
| 3980140 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 79.0 | 5.79e-01 | 100.0% | 41.5% |
| 3838874 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.86 | 77.0 | 5.22e-01 | 96.4% | 29.4% |
| 5063011 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.85 | 76.0 | 5.11e-01 | 100.0% | 91.5% |
| 3963980 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 78.0 | 5.61e-01 | 100.0% | 51.7% |
| 4009350 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.84 | 76.0 | 5.01e-01 | 100.0% | 81.0% |
| 5033151 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.84 | 75.0 | 5.23e-01 | 100.0% | 87.1% |
| 3385474 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 74.0 | 5.04e-01 | 96.4% | 30.6% |
| 3981045 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.82 | 73.0 | 5.10e-01 | 96.4% | 33.3% |
| 5002766 | 148.1.3.413 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30665 | 0.70 | 41.0 | 3.69e-01 | 80.0% | 41.3% |
| 4987389 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.69 | 40.0 | 3.25e-01 | 80.0% | 31.0% |
| 3915773 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.65 | 38.0 | 3.18e-01 | 80.0% | 31.0% |
| 3509140 | 523.1.1.0 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain | 0.63 | 42.0 | 3.69e-01 | 96.4% | 44.7% |
| 3923643 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 42.0 | 3.32e-01 | 76.4% | 36.5% |
| 4946868 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 35.0 | 3.05e-01 | 76.4% | 41.2% |
| 3278485 | 219.1.1.49 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C70 | 0.52 | 44.0 | 3.13e-01 | 100.0% | 69.7% |
| 3326967 | 170.1.1.15 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 | 0.52 | 40.0 | 3.60e-01 | 96.4% | 61.3% |
| 3595174 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.50 | 41.0 | 3.39e-01 | 100.0% | 50.4% |