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AAY24981.1
Arc-VirAY950802__AAY24981.1__X__00055
Identity
- Accession:
- AY950802 ↗
- Protein ID:
- AAY24981.1 ↗
- Kingdom:
- archaea
Quality
40.5
mean pLDDT
Taxonomy
Helvetiavirae›
Dividoviricota›
Laserviricetes›
Halopanivirales›
Sphaerolipoviridae›
Alphasphaerolipovirus›
Haloarcula_hispanica_SH1_virus
TaxID: 326574
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 72-180
D2
high
residues 234-293
D3
medium
residues 452-520
Domain cluster:
representative
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.78 | 62.0 | 5.13e-01 | 84.1% | 55.3% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.75 | 56.0 | 5.90e-01 | 82.6% | 88.5% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.74 | 59.0 | 5.84e-01 | 84.1% | 80.8% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 58.0 | 4.92e-01 | 82.6% | 73.6% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.73 | 56.0 | 4.75e-01 | 81.2% | 53.6% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.73 | 58.0 | 4.82e-01 | 84.1% | 72.2% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 57.0 | 6.07e-01 | 89.9% | 93.5% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.72 | 57.0 | 4.88e-01 | 82.6% | 66.0% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.72 | 55.0 | 5.83e-01 | 79.7% | 100.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 56.0 | 5.93e-01 | 82.6% | 100.0% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 56.0 | 5.61e-01 | 82.6% | 84.5% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.72 | 56.0 | 3.57e-01 | 82.6% | 19.4% |
| 1pw4A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.72 | 62.0 | 4.41e-01 | 100.0% | 31.6% |
| 1n1cA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.71 | 63.0 | 5.90e-01 | 97.1% | 80.5% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 62.0 | 5.64e-01 | 94.2% | 88.9% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 63.0 | 4.67e-01 | 97.1% | 77.2% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.70 | 55.0 | 3.78e-01 | 82.6% | 28.2% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 62.0 | 5.59e-01 | 98.6% | 72.5% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 55.0 | 3.88e-01 | 84.1% | 30.3% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.69 | 63.0 | 5.22e-01 | 100.0% | 73.9% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.69 | 54.0 | 5.12e-01 | 82.6% | 70.4% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 54.0 | 4.42e-01 | 82.6% | 53.8% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.69 | 52.0 | 5.46e-01 | 84.1% | 90.2% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.69 | 52.0 | 5.05e-01 | 81.2% | 74.4% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 53.0 | 5.30e-01 | 82.6% | 85.9% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.68 | 52.0 | 4.40e-01 | 81.2% | 72.3% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 61.0 | 5.73e-01 | 97.1% | 96.3% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 51.0 | 3.40e-01 | 81.2% | 21.8% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 47.0 | 4.64e-01 | 76.8% | 68.0% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 61.0 | 5.47e-01 | 98.6% | 90.2% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 51.0 | 5.34e-01 | 81.2% | 88.9% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 51.0 | 3.96e-01 | 84.1% | 100.0% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.65 | 56.0 | 5.16e-01 | 100.0% | 72.5% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.65 | 49.0 | 5.20e-01 | 82.6% | 96.6% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.65 | 59.0 | 3.63e-01 | 100.0% | 22.0% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.65 | 56.0 | 4.85e-01 | 100.0% | 69.0% |
| 7smtA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.65 | 58.0 | 4.29e-01 | 98.6% | 41.4% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.65 | 56.0 | 5.29e-01 | 100.0% | 78.8% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 47.0 | 4.58e-01 | 78.3% | 71.1% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 46.0 | 4.51e-01 | 78.3% | 70.3% |
| 3wmeA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.63 | 49.0 | 3.13e-01 | 82.6% | 19.1% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 57.0 | 4.95e-01 | 100.0% | 81.0% |
| 3qkyA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 49.0 | 3.38e-01 | 100.0% | 23.9% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 54.0 | 4.99e-01 | 100.0% | 80.6% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 53.0 | 4.60e-01 | 98.6% | 73.0% |
| 2q5zB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.62 | 55.0 | 4.94e-01 | 97.1% | 73.4% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.62 | 54.0 | 4.26e-01 | 92.8% | 72.2% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 46.0 | 4.40e-01 | 81.2% | 69.1% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.61 | 46.0 | 4.79e-01 | 82.6% | 93.8% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.61 | 46.0 | 3.54e-01 | 81.2% | 36.6% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.61 | 55.0 | 4.64e-01 | 100.0% | 63.4% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.61 | 45.0 | 3.98e-01 | 78.3% | 54.5% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 54.0 | 4.83e-01 | 100.0% | 79.4% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.60 | 46.0 | 3.74e-01 | 82.6% | 44.1% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 48.0 | 4.85e-01 | 89.9% | 88.1% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 51.0 | 4.77e-01 | 94.2% | 90.7% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.60 | 53.0 | 4.91e-01 | 100.0% | 78.2% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 44.0 | 4.62e-01 | 78.3% | 92.3% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 50.0 | 4.29e-01 | 98.6% | 81.7% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.59 | 45.0 | 4.36e-01 | 81.2% | 75.3% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.59 | 50.0 | 3.73e-01 | 100.0% | 69.0% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 3.98e-01 | 81.2% | 60.0% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 44.0 | 4.33e-01 | 89.9% | 75.6% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 40.0 | 3.95e-01 | 75.4% | 68.9% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.57 | 48.0 | 4.41e-01 | 100.0% | 83.7% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.57 | 47.0 | 4.49e-01 | 98.6% | 81.4% |
| 4nq0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 43.0 | 3.00e-01 | 98.6% | 23.2% |
| 7vwtA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.56 | 48.0 | 3.16e-01 | 98.6% | 31.1% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 48.0 | 4.12e-01 | 100.0% | 78.0% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 48.0 | 4.25e-01 | 98.6% | 83.2% |
| 5c9eB01 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.53 | 39.0 | 3.72e-01 | 97.1% | 65.5% |
| 4dk4B00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.52 | 43.0 | 3.13e-01 | 97.1% | 50.2% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 41.0 | 2.68e-01 | 87.0% | 44.8% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 45.0 | 3.53e-01 | 100.0% | 96.6% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4587769 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.77 | 61.0 | 6.36e-01 | 82.6% | 92.3% |
| 3698361 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.77 | 61.0 | 5.42e-01 | 84.1% | 64.2% |
| 3976215 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.75 | 60.0 | 4.49e-01 | 84.1% | 52.9% |
| 4373203 | 605.1.1.131 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Val_tRNA-synt_C | 0.75 | 60.0 | 6.26e-01 | 84.1% | 93.8% |
| 3763195 | 1072.1.1.1 ↗ | alpha bundles › Hsp90 co-chaperone Cdc37 N-terminal domain › Hsp90 co-chaperone Cdc37 N-terminal domain › Hsp90 co-chaperone Cdc37 N-terminal domain › CDC37_N | 0.74 | 58.0 | 4.58e-01 | 82.6% | 54.1% |
| 3783206 | 630.1.1.2 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › PF29521 | 0.74 | 66.0 | 5.28e-01 | 97.1% | 97.7% |
| 3762595 | 604.7.1.13 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 | 0.74 | 59.0 | 5.31e-01 | 84.1% | 67.8% |
| 3708019 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.73 | 58.0 | 4.79e-01 | 84.1% | 51.3% |
| 4673 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.73 | 59.0 | 6.08e-01 | 89.9% | 89.4% |
| 4975739 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 57.0 | 3.48e-01 | 82.6% | 15.8% |
| 3909017 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.73 | 58.0 | 5.25e-01 | 84.1% | 68.9% |
| 4468389 | 5086.1.1.101 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 | 0.73 | 56.0 | 4.55e-01 | 81.2% | 65.8% |
| 4017176 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.72 | 66.0 | 5.04e-01 | 100.0% | 79.3% |
| 3471712 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.72 | 55.0 | 4.44e-01 | 81.2% | 61.6% |
| 3911275 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.71 | 56.0 | 3.42e-01 | 84.1% | 20.2% |
| 3408508 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.71 | 57.0 | 5.38e-01 | 84.1% | 77.5% |
| 5042955 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.71 | 54.0 | 3.14e-01 | 81.2% | 21.4% |
| 3961148 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 55.0 | 4.52e-01 | 82.6% | 77.5% |
| 3705716 | 3559.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 | 0.70 | 55.0 | 4.38e-01 | 82.6% | 45.4% |
| 3618651 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.70 | 56.0 | 5.17e-01 | 84.1% | 69.4% |
| 3626122 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 54.0 | 5.83e-01 | 81.2% | 96.7% |
| 3306481 | 604.12.1.84 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PF26575 | 0.70 | 57.0 | 5.95e-01 | 94.2% | 92.3% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.70 | 55.0 | 4.60e-01 | 82.6% | 88.2% |
| 3420386 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.69 | 63.0 | 5.78e-01 | 100.0% | 83.3% |
| 3221764 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.69 | 61.0 | 5.83e-01 | 100.0% | 82.5% |
| 3933742 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.69 | 64.0 | 4.78e-01 | 100.0% | 63.7% |
| 3734962 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.69 | 61.0 | 4.21e-01 | 100.0% | 30.4% |
| 4216571 | 601.54.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 | 0.69 | 63.0 | 5.10e-01 | 100.0% | 92.0% |
| 4092572 | 601.31.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ › Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ › Rsd_AlgQ | 0.69 | 52.0 | 3.94e-01 | 81.2% | 35.2% |
| 3319818 | 604.12.1.5 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SUV3_C | 0.69 | 58.0 | 5.50e-01 | 98.6% | 77.5% |
| 4116038 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 54.0 | 4.09e-01 | 84.1% | 67.1% |
| 1291200 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.68 | 53.0 | 3.44e-01 | 82.6% | 20.7% |
| 4976290 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.68 | 58.0 | 5.55e-01 | 92.8% | 92.5% |
| 4015804 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.68 | 60.0 | 4.72e-01 | 100.0% | 48.3% |
| 2663455 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.68 | 52.0 | 5.32e-01 | 82.6% | 94.1% |
| 3508712 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.68 | 61.0 | 4.14e-01 | 100.0% | 81.2% |
| 3983042 | 3711.1.1.3 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Metal_resist | 0.68 | 52.0 | 4.72e-01 | 81.2% | 65.6% |
| 5075089 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.68 | 61.0 | 4.31e-01 | 100.0% | 35.1% |
| 3605875 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.68 | 61.0 | 5.12e-01 | 100.0% | 84.3% |
| 3403227 | 192.8.1.465 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CHD5 | 0.67 | 51.0 | 4.38e-01 | 81.2% | 57.3% |
| 4132296 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.67 | 52.0 | 5.58e-01 | 82.6% | 95.0% |
| 3485641 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 58.0 | 5.62e-01 | 95.7% | 85.3% |
| 3189247 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.65 | 50.0 | 3.41e-01 | 81.2% | 25.6% |
| 2412 | 532.2.1.3 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › TyeA | 0.65 | 56.0 | 5.16e-01 | 100.0% | 72.5% |
| 162201 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.65 | 59.0 | 4.92e-01 | 100.0% | 63.8% |
| 8997 | 2002.3.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 | 0.65 | 59.0 | 3.63e-01 | 100.0% | 22.0% |
| 3931883 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.65 | 49.0 | 4.22e-01 | 81.2% | 60.0% |
| 3360681 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.65 | 59.0 | 4.67e-01 | 100.0% | 54.1% |
| 3230351 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.64 | 57.0 | 4.33e-01 | 100.0% | 43.6% |
| 5064397 | 5086.1.1.231 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Rad50_zn_hook | 0.64 | 49.0 | 3.48e-01 | 81.2% | 29.7% |
| 3490726 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.64 | 54.0 | 3.87e-01 | 100.0% | 32.0% |
| 3188597 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.63 | 55.0 | 5.08e-01 | 100.0% | 82.2% |
| 3590473 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.62 | 47.0 | 3.60e-01 | 84.1% | 36.5% |
| 3792012 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 52.0 | 4.87e-01 | 100.0% | 78.9% |
| 4026202 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.61 | 55.0 | 5.02e-01 | 98.6% | 81.1% |
| 3462043 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 53.0 | 4.85e-01 | 97.1% | 75.6% |
| 3218641 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 46.0 | 3.84e-01 | 89.9% | 47.5% |
| 3518386 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.60 | 47.0 | 4.58e-01 | 85.5% | 84.0% |
| 2507423 | 632.2.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › FIVAR | 0.59 | 52.0 | 4.98e-01 | 95.7% | 92.3% |
| 5054079 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.58 | 48.0 | 4.63e-01 | 98.6% | 82.5% |
| 3259115 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.57 | 43.0 | 4.01e-01 | 81.2% | 88.1% |
| 3996707 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 49.0 | 4.25e-01 | 100.0% | 80.0% |
| 4008053 | 4168.1.1.7 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › PF26769 | 0.54 | 39.0 | 3.07e-01 | 81.2% | 34.5% |
D4
medium
residues 808-865