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AY954948.1__AAX90632.1__X__00014
Bact-VirAY954948.1__AAX90632.1__X__00014
Identity
- Accession:
- AY954948 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-206
Domain cluster:
rep: MK448641.1__QBX13135.1__JavanS753_0014__00014__D40-226
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 29.0 | 4.59e-01 | 76.2% | 100.0% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.66 | 54.0 | 5.72e-01 | 90.7% | 93.8% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 31.0 | 4.48e-01 | 70.5% | 100.0% |
| 2cg4A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.63 | 29.0 | 4.22e-01 | 71.5% | 98.8% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.63 | 31.0 | 4.31e-01 | 73.6% | 96.8% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 31.0 | 4.26e-01 | 72.0% | 97.9% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 27.0 | 3.24e-01 | 78.2% | 60.2% |
| 1gh8A00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 29.0 | 4.08e-01 | 72.0% | 96.6% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.59 | 31.0 | 4.00e-01 | 79.8% | 90.6% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 29.0 | 4.06e-01 | 76.7% | 100.0% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.58 | 38.0 | 4.36e-01 | 86.5% | 88.3% |
| 7csxA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 24.0 | 3.66e-01 | 79.3% | 100.0% |
| 2mkcA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 33.0 | 4.04e-01 | 87.0% | 90.7% |
| 1r9wA00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.56 | 36.0 | 4.20e-01 | 87.6% | 89.1% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.55 | 32.0 | 4.12e-01 | 75.1% | 100.0% |
| 3bs9A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 25.0 | 3.59e-01 | 70.5% | 100.0% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 25.0 | 3.61e-01 | 73.6% | 100.0% |
| 1pbuA00 | 3.30.70.1010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain | 0.51 | 38.0 | 4.12e-01 | 81.3% | 92.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031372 | 862.1.1.12 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › PF29905 | 0.86 | 84.0 | 8.33e-01 | 100.0% | 98.0% |
| 3587269 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.76 | 70.0 | 7.02e-01 | 95.9% | 97.9% |
| 2721360 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.71 | 60.0 | 6.12e-01 | 97.4% | 91.4% |
| 2038566 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.66 | 29.0 | 4.34e-01 | 80.3% | 96.4% |
| 3388014 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 29.0 | 4.31e-01 | 72.0% | 98.8% |
| 4483977 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.65 | 34.0 | 4.64e-01 | 70.5% | 98.0% |
| 4060463 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 32.0 | 4.33e-01 | 72.5% | 95.7% |
| 4954911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.63 | 29.0 | 4.25e-01 | 70.5% | 97.6% |
| 5004030 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 33.0 | 4.48e-01 | 80.3% | 100.0% |
| 4519027 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.62 | 29.0 | 4.17e-01 | 72.5% | 98.8% |
| 4565255 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.61 | 30.0 | 4.20e-01 | 79.8% | 100.0% |
| 4599086 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 29.0 | 4.10e-01 | 70.5% | 96.6% |
| 3598810 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.59 | 45.0 | 4.70e-01 | 82.4% | 84.4% |
| 2791434 | 304.55.1.10 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › PPV_E1_DBD | 0.58 | 40.0 | 4.40e-01 | 87.6% | 86.8% |
| 3421851 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.57 | 35.0 | 4.29e-01 | 78.8% | 95.2% |
| 4656995 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.57 | 35.0 | 4.16e-01 | 87.0% | 90.0% |
| 3598586 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 28.0 | 3.30e-01 | 73.1% | 66.2% |
| 5112 | 304.55.1.10 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › PPV_E1_DBD | 0.56 | 36.0 | 4.20e-01 | 87.6% | 89.1% |
| 4988829 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.56 | 30.0 | 3.83e-01 | 81.3% | 89.1% |
| 4959045 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.55 | 38.0 | 4.28e-01 | 80.8% | 89.3% |
| 3596072 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 33.0 | 3.83e-01 | 81.9% | 83.7% |
| 3930134 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.55 | 26.0 | 3.58e-01 | 77.7% | 89.5% |
| 3596967 | 304.46.1.0 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain | 0.54 | 40.0 | 4.35e-01 | 81.9% | 92.4% |
| 5053714 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 34.0 | 3.95e-01 | 79.8% | 97.0% |
| 5032935 | 304.8.1.112 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin | 0.50 | 32.0 | 3.73e-01 | 72.5% | 90.4% |
D2
high
residues 218-288
Domain cluster:
rep: AB910392.1__BAO53053.1__KPP23_026__00027__D201-270
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08708.17 best | PriCT_1 | 45.3 | 7.50e-12 | 93.0% | 89.5% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 50.0 | 4.88e-01 | 78.9% | 62.8% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.70 | 54.0 | 4.36e-01 | 83.1% | 46.8% |
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 41.0 | 4.62e-01 | 70.4% | 75.0% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.70 | 61.0 | 5.66e-01 | 97.2% | 79.8% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.69 | 52.0 | 4.82e-01 | 83.1% | 67.0% |
| 1wgwA00 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.68 | 48.0 | 4.27e-01 | 73.2% | 57.6% |
| 2a0uB01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.67 | 58.0 | 4.55e-01 | 100.0% | 71.9% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 43.0 | 4.87e-01 | 78.9% | 94.1% |
| 7eptR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.64 | 48.0 | 3.24e-01 | 78.9% | 42.5% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.63 | 48.0 | 4.66e-01 | 83.1% | 76.5% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.62 | 42.0 | 3.47e-01 | 70.4% | 81.2% |
| 1o82A00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.61 | 43.0 | 4.38e-01 | 80.3% | 75.7% |
| 3rssA02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 42.0 | 2.80e-01 | 71.8% | 85.2% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 51.0 | 3.50e-01 | 98.6% | 32.1% |
| 4hhxA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.60 | 45.0 | 4.05e-01 | 81.7% | 81.7% |
| 2q0iA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 46.0 | 3.08e-01 | 84.5% | 37.3% |
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.60 | 42.0 | 4.04e-01 | 73.2% | 69.1% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 48.0 | 4.01e-01 | 100.0% | 51.2% |
| 3u4qB04 | 6.10.140.1030 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 48.0 | 4.90e-01 | 100.0% | 94.2% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 42.0 | 3.54e-01 | 77.5% | 77.9% |
| 3rptA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.57 | 50.0 | 3.45e-01 | 98.6% | 50.6% |
| 2f2bA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.56 | 47.0 | 3.28e-01 | 93.0% | 83.3% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.56 | 43.0 | 4.07e-01 | 83.1% | 90.7% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 38.0 | 3.08e-01 | 73.2% | 98.0% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 38.0 | 3.05e-01 | 73.2% | 80.8% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.55 | 41.0 | 3.59e-01 | 80.3% | 88.2% |
| 3qnfA04 | 1.10.3480.20 | Mainly Alpha › Orthogonal Bundle › TorD-like › | 0.55 | 47.0 | 3.58e-01 | 98.6% | 89.3% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 40.0 | 3.31e-01 | 78.9% | 92.5% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 45.0 | 3.91e-01 | 93.0% | 76.1% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 41.0 | 4.37e-01 | 83.1% | 96.8% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 37.0 | 2.94e-01 | 74.6% | 74.1% |
| 2b67A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.52 | 43.0 | 3.14e-01 | 91.5% | 73.0% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.52 | 41.0 | 3.47e-01 | 93.0% | 52.6% |
| 6tkyA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.51 | 43.0 | 3.72e-01 | 100.0% | 82.8% |
| 5cqgA03 | 1.10.10.2210 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 38.0 | 3.76e-01 | 83.1% | 87.3% |
| 3emlA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 38.0 | 2.61e-01 | 84.5% | 66.3% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942022 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.93 | 84.0 | 6.87e-01 | 100.0% | 56.7% |
| 5081313 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.93 | 84.0 | 7.62e-01 | 97.2% | 75.6% |
| 5064030 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.79 | 71.0 | 6.48e-01 | 100.0% | 75.8% |
| 3261605 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.75 | 58.0 | 5.61e-01 | 83.1% | 81.2% |
| 5022532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 55.0 | 5.43e-01 | 91.5% | 74.7% |
| 3434511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 50.0 | 5.27e-01 | 78.9% | 80.0% |
| 3468869 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 50.0 | 5.50e-01 | 78.9% | 94.5% |
| 3463735 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.71 | 49.0 | 5.49e-01 | 78.9% | 94.5% |
| 5055834 | 3009.2.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › STAC domain › STAC domain | 0.70 | 52.0 | 4.97e-01 | 77.5% | 77.5% |
| 185297 | 6035.1.1.2 ↗ | alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain › RepB_primase_C | 0.70 | 61.0 | 5.66e-01 | 97.2% | 79.8% |
| 4932415 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.70 | 48.0 | 4.37e-01 | 71.8% | 100.0% |
| 4029698 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 50.0 | 4.49e-01 | 78.9% | 56.0% |
| 3650614 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 56.0 | 4.71e-01 | 94.4% | 64.8% |
| 3723625 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.66 | 52.0 | 4.28e-01 | 87.3% | 51.1% |
| 3337098 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 57.0 | 5.28e-01 | 100.0% | 100.0% |
| 3718745 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.66 | 50.0 | 4.11e-01 | 84.5% | 91.4% |
| 3503580 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.66 | 51.0 | 4.42e-01 | 85.9% | 65.2% |
| 4971641 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.66 | 55.0 | 5.03e-01 | 97.2% | 81.0% |
| 3258149 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.65 | 50.0 | 4.31e-01 | 84.5% | 53.9% |
| 3819556 | 109.4.1.471 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GCFC | 0.62 | 51.0 | 4.21e-01 | 93.0% | 68.1% |
| 3702713 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 4.10e-01 | 94.4% | 50.3% |
| 3686477 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.62 | 45.0 | 4.49e-01 | 77.5% | 77.3% |
| 4652008 | 181.2.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › CtsR dimerization domain › CtsR dimerization domain › CtsR_C | 0.59 | 42.0 | 4.10e-01 | 74.6% | 70.5% |
| 3941104 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.59 | 50.0 | 4.02e-01 | 95.8% | 67.1% |
| 3718740 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.58 | 49.0 | 4.30e-01 | 100.0% | 64.3% |
| 3509630 | 109.4.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka | 0.57 | 48.0 | 3.65e-01 | 100.0% | 57.9% |
| 3287061 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.57 | 46.0 | 4.04e-01 | 97.2% | 80.8% |
| 3627266 | 109.4.1.1705 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26106 | 0.54 | 45.0 | 3.05e-01 | 98.6% | 22.0% |
| 4022047 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.53 | 46.0 | 3.31e-01 | 98.6% | 32.7% |
| 3502563 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.52 | 42.0 | 3.83e-01 | 94.4% | 84.8% |