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AY954948.1__AAX90646.1__X__00020

Bact-Vir

AY954948.1__AAX90646.1__X__00020

Identity

Accession:
AY954948 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

TaxID: 320831

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-89
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.72 44.0 4.26e-01 72.5% 55.7%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.71 55.0 3.43e-01 82.5% 39.5%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.71 56.0 4.50e-01 85.0% 61.9%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.67 50.0 3.74e-01 80.0% 43.2%
2vckA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.67 58.0 4.38e-01 100.0% 75.0%
1ry9A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.66 58.0 4.93e-01 100.0% 95.5%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 56.0 4.86e-01 100.0% 92.2%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.64 43.0 3.62e-01 80.0% 40.0%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 48.0 3.82e-01 81.2% 93.8%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 4.01e-01 97.5% 85.1%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.63 47.0 3.92e-01 80.0% 69.1%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.63 47.0 3.90e-01 81.2% 80.8%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 50.0 3.34e-01 90.0% 48.1%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.62 53.0 4.43e-01 100.0% 90.0%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 47.0 3.17e-01 81.2% 96.3%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 53.0 4.61e-01 100.0% 89.2%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 44.0 3.69e-01 77.5% 78.3%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 51.0 3.45e-01 93.8% 73.0%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 46.0 3.88e-01 81.2% 98.5%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 52.0 4.53e-01 100.0% 88.3%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 41.0 3.87e-01 71.2% 83.7%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 41.0 3.59e-01 71.2% 92.7%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.60 44.0 3.82e-01 78.8% 71.0%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.59 42.0 3.66e-01 76.2% 78.1%
2rqxA00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 4.30e-01 77.5% 96.3%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.59 46.0 4.04e-01 86.3% 86.9%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.58 40.0 4.18e-01 75.0% 78.9%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.58 47.0 4.74e-01 87.5% 97.5%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 3.80e-01 97.5% 84.9%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 47.0 3.10e-01 90.0% 44.6%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.57 39.0 3.19e-01 70.0% 65.4%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 38.0 3.36e-01 70.0% 71.3%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 49.0 4.34e-01 96.2% 82.5%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.56 47.0 4.47e-01 96.2% 85.9%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.56 44.0 4.05e-01 86.3% 98.1%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 48.0 3.23e-01 95.0% 64.6%
3tu3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 47.0 4.21e-01 100.0% 94.1%
1pzsA00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.55 39.0 3.16e-01 77.5% 97.1%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 40.0 3.42e-01 78.8% 66.9%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 44.0 3.88e-01 91.3% 61.7%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.53 44.0 3.41e-01 96.2% 90.6%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.53 45.0 4.47e-01 100.0% 90.7%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.53 40.0 2.86e-01 82.5% 34.8%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 39.0 3.34e-01 81.2% 50.7%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.52 41.0 3.39e-01 87.5% 46.8%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.72e-01 100.0% 97.4%
1d1jB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 40.0 3.42e-01 85.0% 50.0%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.51 41.0 3.99e-01 88.7% 80.9%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.51 36.0 4.01e-01 77.5% 100.0%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 42.0 3.62e-01 95.0% 90.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4436313 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.90 84.0 8.04e-01 100.0% 96.7%
4964031 7089.1.1.7 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF7543 0.74 59.0 6.30e-01 86.3% 97.1%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.69 52.0 5.29e-01 81.2% 92.5%
3740897 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.69 55.0 3.59e-01 85.0% 50.4%
3727954 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.69 52.0 3.77e-01 81.2% 29.3%
3645476 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.67 52.0 4.85e-01 82.5% 79.0%
3697524 9.2.1.7 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970 0.66 45.0 4.39e-01 71.2% 78.9%
4929596 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 54.0 3.36e-01 88.7% 95.2%
5078190 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.66 45.0 3.15e-01 71.2% 39.2%
5011728 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.66 51.0 4.85e-01 83.7% 78.9%
3272624 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.65 58.0 4.97e-01 100.0% 75.4%
3935899 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 54.0 3.54e-01 93.8% 76.1%
3327101 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.62 44.0 4.44e-01 77.5% 73.8%
3492352 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.62 53.0 4.96e-01 100.0% 93.3%
4024970 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 49.0 3.07e-01 85.0% 43.3%
4122018 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.62 54.0 5.05e-01 100.0% 96.0%
4029107 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 54.0 3.76e-01 98.8% 57.5%
3944143 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.62 49.0 3.93e-01 86.3% 83.7%
3417117 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 46.0 3.04e-01 80.0% 36.4%
3226500 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 49.0 3.48e-01 90.0% 27.2%
1691937 241.19.1.1 a+b two layers › Type III secretory system chaperone-like › Transposon Tn7 transposition protein TnsE C-terminal domain › Transposon Tn7 transposition protein TnsE C-terminal domain › TnsE_C 0.61 49.0 4.00e-01 91.3% 68.3%
3179848 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.61 51.0 4.41e-01 100.0% 84.9%
4937627 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.99e-01 92.5% 94.4%
2803292 5.1.3.25 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.61 52.0 3.58e-01 100.0% 86.0%
3910253 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.60 52.0 4.84e-01 100.0% 95.2%
4020590 2008.1.1.99 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 0.60 51.0 3.65e-01 100.0% 70.5%
396 2.2.1.8 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertus-S5-tox 0.60 41.0 3.87e-01 71.2% 83.7%
1140096 5.1.3.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › YqgU 0.60 47.0 3.19e-01 87.5% 44.5%
4495385 5.1.3.20 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 0.59 50.0 3.27e-01 93.8% 55.7%
5044599 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.59 52.0 3.06e-01 98.8% 33.4%
4994932 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 44.0 3.30e-01 80.0% 80.5%
4192565 5.1.4.29 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PD40 0.59 50.0 3.42e-01 96.2% 75.0%
3900153 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 49.0 3.87e-01 93.8% 89.1%
4142474 5.1.4.357 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDCP 0.58 51.0 3.31e-01 100.0% 96.9%
3198094 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.58 47.0 4.73e-01 87.5% 97.5%
2320976 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.58 50.0 3.81e-01 97.5% 84.5%
3212893 5.1.3.57 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 0.58 50.0 3.30e-01 97.5% 94.7%
3282063 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.58 45.0 3.89e-01 83.7% 98.4%
3855453 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.57 45.0 3.01e-01 85.0% 41.9%
4590245 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.57 49.0 3.97e-01 98.8% 95.7%
3718996 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 2.97e-01 92.5% 55.1%
3739528 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.57 50.0 3.74e-01 98.8% 81.5%
4435338 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.57 44.0 2.88e-01 83.7% 55.0%
3622343 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.57 51.0 3.61e-01 100.0% 55.4%
3596879 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.19e-01 98.8% 25.5%
3460976 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.56 45.0 3.04e-01 90.0% 49.0%
4942258 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.56 42.0 3.33e-01 81.2% 69.7%
3416070 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 3.12e-01 96.2% 95.5%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.55 42.0 3.84e-01 82.5% 98.2%
3563261 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 46.0 3.24e-01 96.2% 80.4%
3492201 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.55 44.0 4.57e-01 87.5% 96.0%
4418230 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.55 38.0 2.61e-01 73.8% 38.1%
3947242 206.1.1.14 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.54 43.0 2.84e-01 86.3% 49.3%
3441153 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 45.0 2.88e-01 93.8% 31.1%
2464202 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.54 45.0 4.48e-01 92.5% 95.2%
3482455 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.54 47.0 3.53e-01 98.8% 78.1%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.54 37.0 3.67e-01 72.5% 72.9%
5026576 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.53 41.0 4.07e-01 90.0% 80.0%
4209630 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.52 44.0 3.38e-01 98.8% 66.7%
3935896 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.52 42.0 3.64e-01 88.7% 55.4%
3962450 9.27.1.0 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.51 41.0 3.77e-01 88.7% 87.6%
5028909 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.51 44.0 2.77e-01 100.0% 83.5%
3495285 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.51 42.0 3.40e-01 90.0% 49.3%