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AY954951.1__AAX90802.1__X__00064
Bact-VirAY954951.1__AAX90802.1__X__00064
Identity
- Accession:
- AY954951 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Taxonomy
TaxID: 2908097
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-69
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07768.16 best | PVL_ORF50 | 72.4 | 5.60e-20 | 94.7% | 44.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i1rB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.75 | 51.0 | 3.56e-01 | 71.9% | 24.0% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.61 | 45.0 | 3.63e-01 | 77.2% | 57.0% |
| 1s70B01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.57 | 37.0 | 2.73e-01 | 73.7% | 23.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3615064 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.89 | 63.0 | 4.84e-01 | 75.4% | 36.5% |
| 3938707 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.89 | 63.0 | 4.85e-01 | 73.7% | 43.5% |
| 4016531 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.85 | 63.0 | 4.04e-01 | 78.9% | 25.3% |
| 3193726 | 101.1.2.267 ↗ | alpha arrays › HTH › HTH › winged helix domain › Nse4_C | 0.84 | 61.0 | 4.35e-01 | 75.4% | 34.5% |
| 3739121 | 601.16.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase | 0.83 | 53.0 | 3.96e-01 | 73.7% | 28.5% |
| 3391836 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.61 | 50.0 | 3.04e-01 | 94.7% | 79.0% |
| 4514585 | 207.6.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind+RTX_C | 0.58 | 42.0 | 2.74e-01 | 82.5% | 63.5% |