←Back to structures
AY954959.1__AAX91368.1__X__00013
Bact-VirAY954959.1__AAX91368.1__X__00013
Identity
- Accession:
- AY954959 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Taxonomy
TaxID: 2936814
Cluster
View cluster (351 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11367.15 best | Tail_completion_gp17 | 30.1 | 6.50e-07 | 80.0% | 32.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.86 | 72.0 | 5.23e-01 | 92.0% | 36.2% |
| 3ay3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 44.0 | 2.90e-01 | 78.0% | 63.9% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.58 | 45.0 | 3.47e-01 | 94.0% | 35.5% |
| 4l7aA00 | 3.40.390.70 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › | 0.55 | 47.0 | 3.01e-01 | 100.0% | 32.6% |
| 1e6bA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 42.0 | 3.28e-01 | 94.0% | 39.6% |
| 2gnoA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 41.0 | 3.30e-01 | 88.0% | 89.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034595 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.76 | 59.0 | 4.52e-01 | 88.0% | 39.2% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.75 | 64.0 | 4.59e-01 | 98.0% | 40.0% |
| 3742459 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.66 | 47.0 | 3.74e-01 | 76.0% | 68.0% |
| 3835014 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.62 | 51.0 | 3.46e-01 | 96.0% | 83.0% |
| 3871657 | 264.1.1.3 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CNPase | 0.61 | 53.0 | 3.44e-01 | 100.0% | 62.9% |
| 3972736 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 45.0 | 3.19e-01 | 90.0% | 34.3% |
| 3753935 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.57 | 44.0 | 3.28e-01 | 94.0% | 76.2% |
| 3199093 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.54 | 41.0 | 3.10e-01 | 94.0% | 41.8% |
| 3244846 | 109.36.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Protein transport protein SEC39 › Protein transport protein SEC39 | 0.52 | 41.0 | 2.42e-01 | 96.0% | 9.0% |