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Alk-exo
Euk-VirEuproctis_pseudoconspersa_nucleopolyhedrovirus
Alk-exo__YP_002854721__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467
Identity
- Accession:
- YP_002854721 ↗
- Protein ID:
- Alk-exo
- Kingdom:
- euk
Quality
85.3
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Euproctis_pseudoconspersa_nucleopolyhedrovirus
TaxID: 307467
Cluster
View cluster (45 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 60-240
Domain cluster:
rep: ALK-EXO__YP_009250080__Urbanus_proteus_nucleopolyhedrovirus__1675866__D84-261
D2
high
residues 249-317
Domain cluster:
rep: alkaline_exonuclease__YP_010086987__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D258-315
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00653.28 best | BIR | 27.1 | 7.00e-06 | 78.3% | 84.3% |
D3
high
residues 331-409
Domain cluster:
rep: alkaline_exonuclease__YP_009117034__Pseudoplusia_includens_SNPV_IE__1592335__D351-412
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2poiA00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.75 | 60.0 | 6.10e-01 | 87.3% | 96.2% |
| 1i3oF00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.73 | 63.0 | 5.98e-01 | 96.2% | 79.6% |
| 1f9xA00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.70 | 61.0 | 5.40e-01 | 97.5% | 69.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 154260 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.80 | 73.0 | 6.45e-01 | 97.5% | 74.3% |
| 3874336 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.78 | 67.0 | 6.59e-01 | 92.4% | 92.9% |
| 4094681 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.77 | 68.0 | 5.12e-01 | 94.9% | 45.3% |
| 166845 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.77 | 67.0 | 6.11e-01 | 94.9% | 80.6% |
| 3492215 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.73 | 65.0 | 6.08e-01 | 100.0% | 79.6% |
| 3865601 | 381.1.1.1 ↗ | few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR | 0.72 | 63.0 | 6.14e-01 | 94.9% | 94.1% |
| 3841843 | 386.1.1.64 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_12 | 0.57 | 36.0 | 4.14e-01 | 78.5% | 90.9% |
| 3822828 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.57 | 41.0 | 4.35e-01 | 87.3% | 92.3% |
| 3899324 | 376.1.6.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR_1 | 0.53 | 43.0 | 4.15e-01 | 100.0% | 80.0% |
| 3636203 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.52 | 31.0 | 3.62e-01 | 81.0% | 88.7% |
| 3808540 | 376.1.6.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › PF26200 | 0.52 | 32.0 | 2.64e-01 | 88.6% | 32.0% |
| 3190295 | 376.1.6.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain | 0.51 | 29.0 | 3.32e-01 | 87.3% | 80.0% |
D4
medium
residues 1-59
Domain cluster:
rep: alkaline_exonuclease__YP_009117034__Pseudoplusia_includens_SNPV_IE__1592335__D14-68
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 25.1 | 9.80e-06 | 91.5% | 6.5% |