←Back to structures

Ankyrin_repeat-containing_protein

Euk-Vir

Raccoonpox_virus

Ankyrin_repeat-containing_protein__YP_009143489__Raccoonpox_virus__10256

Identity

Accession:: YP_009143489 ↗
Protein ID:: Ankyrin_repeat-containing_protein
Kingdom:: euk

Quality

75.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Raccoonpox_virus

TaxID: 10256

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 251-336

PDB

Domain cluster: rep: ankyrin_repeat_protein__YP_009046236__Penguinpox_virus__648998__D314-394

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13637.13 best	Ank_4	33.8	4.40e-08	54.6%	80.0%
PF00023.37	Ank	31.5	2.00e-07	34.9%	90.9%
PF13606.13	Ank_3	21.5	3.10e-04	31.4%	90.3%

D2 medium residues 337-452

PDB

Domain cluster: rep: ankyrin_repeat_protein__NP_938269__Yaba_monkey_tumor_virus__38804__D426-549

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12796.14 best	Ank_2	29.3	1.40e-06	62.9%	70.0%
PF00023.37	Ank	16.9	9.10e-03	25.9%	69.7%

D3 medium residues 453-512

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF09372.16 best	PRANC	31.9	2.00e-07	70.0%	41.2%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fqgA02	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.53	38.0	3.81e-01	83.3%	77.0%
8gy3A02	1.10.760.10	Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain	0.52	38.0	3.19e-01	85.0%	88.9%
1fc3B00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	39.0	3.48e-01	91.7%	98.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3213313	611.3.1.0 ↗	alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.57	39.0	3.62e-01	80.0%	55.0%
None	—		0.54	41.0	3.97e-01	85.0%	98.6%
4410020	102.1.1.27 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5	0.53	40.0	3.55e-01	83.3%	76.7%
4037683	102.1.1.27 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5	0.52	37.0	3.64e-01	78.3%	100.0%

D4 medium residues 513-565

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF09372.16 best	PRANC	40.9	3.10e-10	96.2%	54.6%

CATH (30)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5axmB00	3.30.70.3000	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1)	0.87	74.0	4.68e-01	100.0%	20.5%
5dykA03	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.75	59.0	4.46e-01	86.8%	64.5%
4dxwA02	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.73	59.0	4.67e-01	90.6%	67.9%
4myjA04	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.71	55.0	4.18e-01	86.8%	61.2%
3ocpB00	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.70	56.0	4.26e-01	90.6%	60.9%
2h09A02	1.10.60.10	Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain	0.69	57.0	5.64e-01	100.0%	92.9%
2hyjA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.68	45.0	4.77e-01	73.6%	80.4%
2zb9A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.68	46.0	4.71e-01	71.7%	78.0%
3qqaA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.68	48.0	4.70e-01	79.2%	69.5%
4rz7A02	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.68	56.0	4.37e-01	96.2%	67.8%
3mvpA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.67	44.0	4.66e-01	75.5%	76.6%
3umgA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.67	51.0	4.62e-01	88.7%	62.0%
7jiuA03	3.30.1010.10	Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4	0.66	48.0	3.55e-01	77.4%	61.8%
2b5uA02	1.10.287.620	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins	0.66	46.0	3.25e-01	73.6%	26.1%
5hwoA00	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.66	55.0	3.27e-01	94.3%	34.2%
1zk8A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.66	40.0	4.23e-01	84.9%	69.6%
6pmiF01	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.65	47.0	4.20e-01	81.1%	57.5%
2fd5A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.64	44.0	4.64e-01	83.0%	79.2%
1zarA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.64	39.0	3.27e-01	79.2%	36.0%
3rpzA00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.64	49.0	3.15e-01	86.8%	21.3%
4jykA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.62	46.0	4.45e-01	77.4%	70.7%
4g6dB02	6.10.140.1800	Special › Helix non-globular › Helix Hairpins ›	0.62	48.0	4.34e-01	94.3%	59.3%
2i7uA00	6.10.250.1010	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.62	45.0	4.34e-01	79.2%	77.4%
3iieB03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.61	49.0	4.26e-01	90.6%	75.3%
5gp9A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.59	39.0	4.08e-01	75.5%	72.9%
4cc9B00	1.20.5.4730	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.59	51.0	4.10e-01	94.3%	60.2%
4i9oA00	1.10.246.20	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain	0.56	46.0	4.21e-01	100.0%	88.5%
1b04A03	1.10.287.610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.55	41.0	3.90e-01	79.2%	98.4%
6sziB01	3.20.20.470	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glucansucrase	0.53	43.0	2.65e-01	94.3%	15.2%
3ff5A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	38.0	3.82e-01	81.1%	77.8%

ECOD (33)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5037784	304.48.1.20 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1	0.80	67.0	4.58e-01	100.0%	27.2%
3961309	191.1.1.48 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46	0.77	60.0	4.59e-01	86.8%	36.8%
3896790	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.77	52.0	4.56e-01	81.1%	49.3%
4142281	105.1.1.55 ↗	alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › Latarcin	0.77	65.0	5.35e-01	100.0%	53.2%
3544841	10.12.1.1 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding	0.73	61.0	4.54e-01	94.3%	92.6%
3473995	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.71	57.0	5.37e-01	90.6%	72.3%
1311741	10.12.1.0 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix	0.71	63.0	4.81e-01	100.0%	75.0%
3651501	103.4.1.0 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein	0.71	61.0	5.72e-01	98.1%	93.8%
4591310	101.1.1.58 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_18	0.70	49.0	4.46e-01	73.6%	61.4%
3714508	142.1.1.0 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors	0.70	55.0	4.65e-01	84.9%	52.9%
3959840	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.69	50.0	4.56e-01	79.2%	58.6%
3957512	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.69	51.0	3.92e-01	84.9%	35.0%
3902301	10.12.1.1 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding	0.68	55.0	3.78e-01	90.6%	45.4%
3743841	10.12.1.101 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8	0.67	52.0	3.13e-01	84.9%	12.8%
4615055	2003.6.1.2 ↗	a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase	0.67	51.0	3.24e-01	98.1%	15.5%
3593261	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.67	46.0	4.28e-01	71.7%	58.5%
3174828	103.4.1.15 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF28865	0.66	55.0	4.95e-01	100.0%	82.5%
5003077	101.1.2.141 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_24	0.65	44.0	4.06e-01	73.6%	52.9%
2875870	101.1.2.22 ↗	alpha arrays › HTH › HTH › winged helix domain › PCI	0.65	46.0	4.04e-01	75.5%	50.0%
4569038	101.1.1.5 ↗	alpha arrays › HTH › HTH › Three-helical HTH › TetR_N	0.65	45.0	4.51e-01	77.4%	72.7%
4236937	101.1.1.5 ↗	alpha arrays › HTH › HTH › Three-helical HTH › TetR_N	0.64	44.0	4.31e-01	75.5%	65.0%
3610460	101.1.2.22 ↗	alpha arrays › HTH › HTH › winged helix domain › PCI	0.64	46.0	4.01e-01	75.5%	51.2%
3966271	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.64	45.0	4.09e-01	83.0%	55.7%
3617382	4336.2.1.1 ↗	alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2	0.63	46.0	4.01e-01	83.0%	53.3%
4619372	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.63	52.0	4.74e-01	94.3%	86.3%
3230949	103.4.1.1 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX	0.61	50.0	4.59e-01	100.0%	92.0%
3244785	101.1.17.2 ↗	alpha arrays › HTH › HTH › FF domain › FF	0.61	47.0	4.31e-01	83.0%	62.9%
4928778	3317.1.1.0 ↗	alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain	0.60	43.0	4.22e-01	84.9%	70.0%
3399185	101.1.17.2 ↗	alpha arrays › HTH › HTH › FF domain › FF	0.57	46.0	3.49e-01	86.8%	47.8%
3391114	190.1.1.0 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box	0.56	40.0	3.88e-01	81.1%	78.5%
3231021	3681.1.1.0 ↗	a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit	0.54	38.0	3.44e-01	81.1%	56.5%
3176046	101.1.2.132 ↗	alpha arrays › HTH › HTH › winged helix domain › DUF3591	0.52	42.0	3.75e-01	96.2%	95.3%
5053330	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	35.0	2.39e-01	73.6%	32.7%