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Ankyrin_repeat_domain_containing_protein
Euk-VirPandoravirus_dulcis
Ankyrin_repeat_domain_containing_protein__YP_009430216__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_009430216 ↗
- Protein ID:
- Ankyrin_repeat_domain_containing_protein
- Kingdom:
- euk
Quality
64.4
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-115
D2
medium
residues 116-176
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13637.13 best | Ank_4 | 30.5 | 4.80e-07 | 75.4% | 96.0% |
| PF00023.37 | Ank | 16.2 | 1.50e-02 | 44.3% | 57.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qfvC02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.88 | 76.0 | 7.45e-01 | 91.8% | 92.3% |
| 4n5qA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.85 | 78.0 | 5.06e-01 | 100.0% | 36.1% |
| 2ajaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.83 | 76.0 | 4.65e-01 | 100.0% | 20.4% |
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.83 | 78.0 | 6.52e-01 | 100.0% | 66.0% |
| 3uxgA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.83 | 77.0 | 5.49e-01 | 100.0% | 42.3% |
| 2f37A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.80 | 74.0 | 4.78e-01 | 100.0% | 35.6% |
| 7kb2B01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.77 | 71.0 | 4.98e-01 | 100.0% | 39.5% |
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 63.0 | 4.48e-01 | 96.7% | 36.8% |
| 3ezxA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.72 | 60.0 | 5.46e-01 | 96.7% | 95.3% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.70 | 58.0 | 4.99e-01 | 95.1% | 75.2% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 57.0 | 5.33e-01 | 95.1% | 100.0% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.66 | 57.0 | 5.44e-01 | 100.0% | 100.0% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.65 | 46.0 | 3.96e-01 | 73.8% | 70.2% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 4.34e-01 | 80.3% | 93.3% |
| 1jr3C02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.61 | 50.0 | 4.03e-01 | 91.8% | 77.9% |
| 3as5A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 50.0 | 3.67e-01 | 100.0% | 39.3% |
| 3ly7A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 49.0 | 3.67e-01 | 100.0% | 45.3% |
| 1by1A00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.53 | 42.0 | 3.06e-01 | 96.7% | 56.9% |
| 3od1A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 43.0 | 2.77e-01 | 100.0% | 49.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3634305 | 109.3.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 | 0.87 | 77.0 | 5.72e-01 | 95.1% | 44.3% |
| 3853123 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.86 | 78.0 | 5.69e-01 | 96.7% | 47.3% |
| 3250143 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.86 | 80.0 | 4.74e-01 | 100.0% | 19.2% |
| 3686591 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.85 | 79.0 | 4.63e-01 | 100.0% | 17.5% |
| 3267273 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.84 | 79.0 | 6.21e-01 | 100.0% | 53.0% |
| 3484295 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.82 | 75.0 | 4.76e-01 | 100.0% | 24.0% |
| 3915303 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.81 | 73.0 | 4.89e-01 | 98.4% | 31.4% |
| 3686402 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.79 | 72.0 | 4.73e-01 | 100.0% | 26.8% |
| 4998411 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.75 | 60.0 | 5.69e-01 | 90.2% | 100.0% |
| 4999823 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.74 | 63.0 | 5.79e-01 | 96.7% | 98.8% |
| 5017961 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.74 | 61.0 | 5.00e-01 | 95.1% | 66.4% |
| 3809438 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.71 | 61.0 | 4.94e-01 | 96.7% | 82.5% |
| 4536229 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.69 | 57.0 | 5.32e-01 | 96.7% | 100.0% |
| 3741700 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.68 | 56.0 | 4.67e-01 | 95.1% | 80.9% |
| 1291132 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.68 | 57.0 | 4.57e-01 | 96.7% | 73.1% |
| 3596878 | 109.40.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain | 0.65 | 56.0 | 4.45e-01 | 100.0% | 83.1% |
| 5048651 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.56 | 47.0 | 4.14e-01 | 91.8% | 87.8% |
| 4014225 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.55 | 46.0 | 3.09e-01 | 100.0% | 77.5% |
D3
medium
residues 177-243_260-274
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dznA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 56.0 | 4.05e-01 | 79.3% | 31.4% |
| 3ljnA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 57.0 | 3.79e-01 | 80.5% | 35.5% |
| 3b7bB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.73 | 56.0 | 4.04e-01 | 81.7% | 33.5% |
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 55.0 | 5.19e-01 | 80.5% | 71.1% |
| 5z2mB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 54.0 | 4.54e-01 | 81.7% | 59.1% |
| 7kb2B01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 50.0 | 3.90e-01 | 75.6% | 46.9% |
| 3ehrA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.69 | 52.0 | 4.68e-01 | 81.7% | 63.8% |
| 1uujA00 | 1.20.960.30 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.68 | 39.0 | 4.04e-01 | 87.8% | 60.5% |
| 4g26A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 50.0 | 3.42e-01 | 81.7% | 56.3% |
| 1wdyA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.65 | 60.0 | 4.03e-01 | 100.0% | 56.5% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.65 | 44.0 | 4.64e-01 | 70.7% | 98.6% |
| 5cecB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.61 | 56.0 | 4.21e-01 | 100.0% | 52.8% |
| 4me2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 45.0 | 3.47e-01 | 78.0% | 49.5% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.61 | 45.0 | 4.31e-01 | 76.8% | 77.7% |
| 2kc7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 4.20e-01 | 78.0% | 76.8% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 4.15e-01 | 76.8% | 75.2% |
| 3bgeA01 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.60 | 51.0 | 4.82e-01 | 91.5% | 96.9% |
| 4evfA02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.59 | 40.0 | 4.20e-01 | 70.7% | 98.6% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.58 | 41.0 | 3.92e-01 | 75.6% | 85.0% |
| 1a17A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 43.0 | 3.53e-01 | 79.3% | 67.3% |
| 3mkqB00 | 1.25.40.470 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 45.0 | 3.52e-01 | 91.5% | 38.4% |
| 1tjcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 41.0 | 4.01e-01 | 76.8% | 86.3% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.53 | 40.0 | 3.78e-01 | 81.7% | 66.3% |
| 1h6gA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 39.0 | 3.32e-01 | 75.6% | 74.2% |
| 1zkrB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.53 | 40.0 | 3.32e-01 | 89.0% | 45.5% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.52 | 32.0 | 3.60e-01 | 96.3% | 81.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258006 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.74 | 54.0 | 3.68e-01 | 78.0% | 23.4% |
| 3253180 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.74 | 64.0 | 4.71e-01 | 96.3% | 44.7% |
| 3830650 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.73 | 56.0 | 4.76e-01 | 81.7% | 80.7% |
| 3430064 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.71 | 54.0 | 4.27e-01 | 81.7% | 63.5% |
| 3807461 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.71 | 52.0 | 4.00e-01 | 76.8% | 57.8% |
| 3675551 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.71 | 52.0 | 4.14e-01 | 79.3% | 60.7% |
| 3662781 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.71 | 53.0 | 3.39e-01 | 80.5% | 34.3% |
| 3834245 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.70 | 53.0 | 3.01e-01 | 80.5% | 12.7% |
| 3274261 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 59.0 | 4.67e-01 | 98.8% | 46.1% |
| 3298490 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.69 | 51.0 | 4.57e-01 | 78.0% | 62.6% |
| 3268340 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 51.0 | 4.31e-01 | 78.0% | 52.6% |
| 3325668 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.69 | 53.0 | 4.06e-01 | 81.7% | 57.8% |
| 3263692 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 51.0 | 4.17e-01 | 80.5% | 44.4% |
| 3460241 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.69 | 52.0 | 4.39e-01 | 81.7% | 73.6% |
| 3372578 | 109.4.1.1305 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, TPR_24 | 0.68 | 50.0 | 3.17e-01 | 79.3% | 16.2% |
| 3661283 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.68 | 49.0 | 3.42e-01 | 76.8% | 27.1% |
| 3832763 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.68 | 52.0 | 4.31e-01 | 81.7% | 72.4% |
| 3453416 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.68 | 50.0 | 3.16e-01 | 78.0% | 16.7% |
| 3425657 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.68 | 49.0 | 3.72e-01 | 78.0% | 36.1% |
| 3299038 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.67 | 51.0 | 4.36e-01 | 81.7% | 77.8% |
| 3335164 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.67 | 49.0 | 3.68e-01 | 76.8% | 37.6% |
| 3384026 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.67 | 51.0 | 4.07e-01 | 80.5% | 61.3% |
| 3370311 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.67 | 49.0 | 3.96e-01 | 78.0% | 46.1% |
| 3379364 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.67 | 49.0 | 4.11e-01 | 78.0% | 50.3% |
| 3810776 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.67 | 51.0 | 3.90e-01 | 81.7% | 50.8% |
| 3818260 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.67 | 50.0 | 4.24e-01 | 80.5% | 76.4% |
| 3647977 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.67 | 49.0 | 3.68e-01 | 79.3% | 34.4% |
| 3802454 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 48.0 | 4.13e-01 | 78.0% | 51.4% |
| 3318609 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 48.0 | 4.27e-01 | 78.0% | 60.8% |
| 3337408 | 109.4.1.1374 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 | 0.67 | 48.0 | 3.64e-01 | 78.0% | 36.2% |
| 3333551 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.66 | 49.0 | 3.75e-01 | 79.3% | 53.3% |
| 3832025 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.66 | 48.0 | 4.05e-01 | 78.0% | 52.4% |
| 4015382 | 109.4.1.1228 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_24 | 0.66 | 49.0 | 3.90e-01 | 79.3% | 44.7% |
| 3252035 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.66 | 55.0 | 4.43e-01 | 91.5% | 47.5% |
| 3374155 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.66 | 48.0 | 4.52e-01 | 78.0% | 75.0% |
| 3275448 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.65 | 55.0 | 4.04e-01 | 91.5% | 36.2% |
| 3461675 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.65 | 47.0 | 4.22e-01 | 78.0% | 64.2% |
| 3339436 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.65 | 49.0 | 4.18e-01 | 81.7% | 77.0% |
| 3804606 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.64 | 47.0 | 4.38e-01 | 79.3% | 70.5% |
| 3828651 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.63 | 46.0 | 4.05e-01 | 78.0% | 92.0% |
| 3296368 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.63 | 56.0 | 4.27e-01 | 100.0% | 71.3% |
| 3262021 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.62 | 53.0 | 4.23e-01 | 96.3% | 47.6% |
| 3661216 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.62 | 54.0 | 3.96e-01 | 100.0% | 51.7% |
| 3683719 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.61 | 55.0 | 3.36e-01 | 100.0% | 35.0% |
| 3453247 | 109.59.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › PPR_2 | 0.61 | 44.0 | 4.31e-01 | 79.3% | 81.9% |
| 3818421 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.59 | 52.0 | 3.42e-01 | 100.0% | 47.9% |
| 3348685 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.59 | 52.0 | 4.04e-01 | 100.0% | 57.8% |
| 3826660 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 4.38e-01 | 98.8% | 81.5% |
| 3787732 | 109.4.1.1696 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29070 | 0.59 | 51.0 | 3.03e-01 | 100.0% | 29.3% |
| 3852914 | 173.1.1.2 ↗ | alpha arrays › Uteroglobin-like › Uteroglobin-like › Uteroglobin-like › Feld-I_B | 0.58 | 40.0 | 3.89e-01 | 95.1% | 64.4% |
| 3195661 | 109.4.1.1382 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, TPR_24 | 0.58 | 49.0 | 3.59e-01 | 96.3% | 46.1% |
| 3451828 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.58 | 52.0 | 3.62e-01 | 100.0% | 53.0% |
| 3354085 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 51.0 | 3.65e-01 | 100.0% | 58.8% |
| 3656332 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 52.0 | 3.86e-01 | 100.0% | 62.9% |
| 3659726 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.58 | 50.0 | 4.05e-01 | 100.0% | 78.2% |
| 3373297 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.58 | 51.0 | 3.18e-01 | 100.0% | 30.4% |
| 3424707 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 51.0 | 3.96e-01 | 100.0% | 90.8% |
| 3412596 | 109.4.1.68 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Coatomer_E | 0.57 | 49.0 | 3.42e-01 | 98.8% | 50.0% |
| 3828333 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 48.0 | 4.14e-01 | 96.3% | 77.0% |
| 3643065 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.57 | 49.0 | 2.89e-01 | 98.8% | 13.1% |
| 3320740 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 50.0 | 4.02e-01 | 100.0% | 81.2% |
| 3672432 | 109.46.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › WD40, Beta-prop_IFT122_1st | 0.56 | 44.0 | 2.78e-01 | 87.8% | 20.9% |
| 3460895 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.55 | 47.0 | 4.09e-01 | 98.8% | 100.0% |
D4
medium
residues 292-366
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qfvC02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.80 | 61.0 | 6.52e-01 | 80.0% | 93.8% |
| 7xceA01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 65.0 | 4.42e-01 | 100.0% | 28.7% |
| 3b7bB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.74 | 65.0 | 4.54e-01 | 100.0% | 31.7% |
| 3uxgA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 64.0 | 4.85e-01 | 100.0% | 43.6% |
| 5eidA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 64.0 | 5.31e-01 | 100.0% | 57.7% |
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.72 | 62.0 | 5.63e-01 | 98.7% | 71.1% |
| 3ehrA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.71 | 62.0 | 5.27e-01 | 97.3% | 60.3% |
| 6jd6B00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 63.0 | 4.61e-01 | 100.0% | 38.5% |
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 61.0 | 4.61e-01 | 98.7% | 57.1% |
| 1n11A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.70 | 63.0 | 3.88e-01 | 100.0% | 18.3% |
| 4cymD00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.69 | 63.0 | 4.81e-01 | 100.0% | 46.1% |
| 5ja4D00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 63.0 | 4.94e-01 | 100.0% | 51.0% |
| 5aarA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 63.0 | 4.63e-01 | 100.0% | 45.9% |
| 4hbdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 61.0 | 4.24e-01 | 100.0% | 30.6% |
| 2f37A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 61.0 | 4.22e-01 | 100.0% | 43.3% |
| 1a5eA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.66 | 56.0 | 4.41e-01 | 100.0% | 44.9% |
| 3lvqE02 | 1.25.40.950 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 55.0 | 5.60e-01 | 96.0% | 98.6% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.60 | 44.0 | 4.11e-01 | 78.7% | 91.7% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.59 | 49.0 | 4.57e-01 | 96.0% | 86.0% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 43.0 | 3.99e-01 | 81.3% | 63.8% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 41.0 | 3.93e-01 | 80.0% | 87.6% |
| 3mg2B01 | 1.10.2090.10 | Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain | 0.52 | 39.0 | 3.25e-01 | 84.0% | 67.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3999928 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.86 | 57.0 | 5.94e-01 | 72.0% | 72.9% |
| 3186792 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.80 | 62.0 | 4.93e-01 | 100.0% | 42.8% |
| 3800938 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 63.0 | 4.81e-01 | 100.0% | 41.2% |
| 3541059 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.75 | 66.0 | 4.71e-01 | 100.0% | 35.9% |
| 3296677 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 68.0 | 5.81e-01 | 100.0% | 64.3% |
| 3791268 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.74 | 65.0 | 4.07e-01 | 100.0% | 19.7% |
| 4022900 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.74 | 66.0 | 4.87e-01 | 100.0% | 44.1% |
| 3537368 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.73 | 65.0 | 5.22e-01 | 100.0% | 52.6% |
| 3748383 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.72 | 63.0 | 4.38e-01 | 100.0% | 30.9% |
| 3723266 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.72 | 64.0 | 4.54e-01 | 100.0% | 34.3% |
| 3384964 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.72 | 64.0 | 4.12e-01 | 100.0% | 22.9% |
| 3258040 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.72 | 65.0 | 4.68e-01 | 100.0% | 40.5% |
| 3462930 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.71 | 63.0 | 5.04e-01 | 100.0% | 51.4% |
| 3578530 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.70 | 60.0 | 4.28e-01 | 98.7% | 32.9% |
| 3728836 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 61.0 | 5.10e-01 | 100.0% | 56.8% |
| 3686590 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.69 | 63.0 | 4.64e-01 | 100.0% | 40.5% |
| 3288019 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.68 | 61.0 | 3.68e-01 | 100.0% | 15.7% |
| 3730432 | 109.3.1.33 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 | 0.68 | 60.0 | 4.21e-01 | 100.0% | 31.3% |
| 3723163 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.68 | 62.0 | 5.15e-01 | 100.0% | 65.4% |
| 3890428 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.68 | 62.0 | 4.64e-01 | 100.0% | 48.3% |
| 3304100 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.68 | 62.0 | 5.11e-01 | 100.0% | 58.5% |
| 3932448 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.68 | 61.0 | 4.55e-01 | 100.0% | 41.1% |
| 3264552 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.67 | 57.0 | 5.29e-01 | 100.0% | 74.7% |
| 3324090 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.65 | 57.0 | 4.72e-01 | 100.0% | 75.7% |
| 3376755 | 109.4.1.1356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, PPR_3, PPR_long | 0.65 | 56.0 | 4.96e-01 | 100.0% | 67.8% |
| 3301008 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.63 | 55.0 | 3.67e-01 | 100.0% | 33.5% |
| 3384024 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.61 | 51.0 | 4.82e-01 | 100.0% | 77.9% |
| 3804606 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.59 | 50.0 | 4.59e-01 | 100.0% | 71.4% |
| 4998188 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.58 | 45.0 | 3.32e-01 | 89.3% | 83.5% |
| 4988984 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.57 | 45.0 | 3.18e-01 | 88.0% | 51.4% |
| 5044199 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.53 | 40.0 | 2.88e-01 | 85.3% | 47.3% |
| 5037011 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.51 | 39.0 | 2.80e-01 | 86.7% | 27.7% |
D5
medium
residues 367-473
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 51.0 | 4.19e-01 | 97.2% | 63.3% |
| 5dmmA00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.56 | 48.0 | 3.64e-01 | 100.0% | 68.4% |
| 2yvkA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.55 | 42.0 | 3.78e-01 | 80.4% | 69.6% |
| 7szaA01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 37.0 | 3.53e-01 | 72.0% | 97.6% |
D6
medium
residues 642-716