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Ankyrin_repeat_domain_containing_protein
Euk-VirPandoravirus_neocaledonia
Ankyrin_repeat_domain_containing_protein__YP_009482107__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482107 ↗
- Protein ID:
- Ankyrin_repeat_domain_containing_protein
- Kingdom:
- euk
Quality
80.5
mean pLDDT
Cluster
View cluster (63 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-79
Domain cluster:
rep: F-box_domain__YP_008437493__Pandoravirus_salinus__1349410__D24-74
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 29.4 | 7.70e-07 | 77.2% | 87.2% |
D2
medium
residues 80-187
D3
medium
residues 188-246_260-279
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eu9C00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.76 | 70.0 | 4.91e-01 | 98.7% | 37.2% |
| 4hi8A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.76 | 70.0 | 5.35e-01 | 100.0% | 67.6% |
| 6jd6B00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 69.0 | 5.10e-01 | 100.0% | 63.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267273 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.81 | 70.0 | 6.07e-01 | 98.7% | 63.5% |
| 3444013 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.65 | 57.0 | 4.63e-01 | 100.0% | 55.5% |
| 1642667 | 109.4.1.1440 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 | 0.58 | 50.0 | 3.86e-01 | 100.0% | 48.2% |
| 3754249 | 109.26.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_Nup160_C, TPR_NUP160_120_M | 0.51 | 41.0 | 3.11e-01 | 94.9% | 37.3% |