←Back to structures
Ankyrin_repeat_domain_containing_protein
Euk-VirPandoravirus_neocaledonia
Ankyrin_repeat_domain_containing_protein__YP_009482315__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482315 ↗
- Protein ID:
- Ankyrin_repeat_domain_containing_protein
- Kingdom:
- euk
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 58-113
D2
medium
residues 114-203
Domain cluster:
rep: Ankyrin_repeat_domain_containing_protein__YP_009482714__Pandoravirus_quercus__2107709__D78-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12796.14 best | Ank_2 | 29.6 | 1.20e-06 | 92.2% | 91.1% |
D3
medium
residues 204-347
Domain cluster:
rep: ankyrin_repeat_domain__YP_008438182__Pandoravirus_salinus__1349410__D166-271
D4
medium
residues 348-444
Domain cluster:
rep: Ankyrin_repeat_domain_containing_protein__YP_009482714__Pandoravirus_quercus__2107709__D78-176
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12796.14 best | Ank_2 | 30.9 | 4.60e-07 | 77.3% | 86.7% |
| PF00023.37 | Ank | 15.0 | 3.60e-02 | 45.4% | 69.7% |
D5
medium
residues 445-525
Domain cluster:
rep: Ankyrin_repeat_domain_containing_protein__YP_009482383__Pandoravirus_neocaledonia__2107708__D153-214
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jgwA02 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.65 | 49.0 | 3.58e-01 | 82.7% | 84.6% |
| 1bpoA02 | 1.25.40.30 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 44.0 | 3.59e-01 | 98.8% | 41.3% |
| 4tkrA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.57 | 41.0 | 3.23e-01 | 76.5% | 83.6% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 49.0 | 3.38e-01 | 95.1% | 49.4% |
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 47.0 | 3.81e-01 | 95.1% | 59.7% |
| 3q41A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 46.0 | 3.64e-01 | 97.5% | 92.1% |
| 2kckA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 42.0 | 3.87e-01 | 100.0% | 62.5% |
| 2ifcA01 | 1.10.580.10 | Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 | 0.53 | 42.0 | 3.12e-01 | 90.1% | 71.7% |
| 3ha4B00 | 1.20.58.690 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 46.0 | 4.08e-01 | 100.0% | 85.0% |
| 6ok0B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 41.0 | 3.68e-01 | 97.5% | 59.7% |
| 2ii2A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.51 | 43.0 | 4.12e-01 | 96.3% | 81.6% |
| 2oodA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 43.0 | 2.96e-01 | 98.8% | 36.8% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.51 | 35.0 | 3.49e-01 | 74.1% | 85.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3251262 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 63.0 | 4.36e-01 | 100.0% | 46.2% |
| 3453925 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.69 | 56.0 | 4.62e-01 | 100.0% | 49.7% |
| 3259402 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.67 | 61.0 | 3.81e-01 | 100.0% | 25.6% |
| 3264205 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.67 | 58.0 | 4.61e-01 | 95.1% | 85.0% |
| 3383595 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.65 | 53.0 | 4.89e-01 | 97.5% | 68.6% |
| 3384476 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.64 | 52.0 | 3.73e-01 | 97.5% | 30.9% |
| 3822373 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.64 | 55.0 | 4.45e-01 | 100.0% | 50.7% |
| 3656517 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.63 | 53.0 | 3.98e-01 | 100.0% | 38.5% |
| 3295765 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.63 | 54.0 | 4.64e-01 | 100.0% | 59.2% |
| 3454446 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.63 | 53.0 | 4.39e-01 | 100.0% | 52.4% |
| 3643338 | 109.4.1.1292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 | 0.62 | 55.0 | 4.49e-01 | 100.0% | 52.7% |
| 60040 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 46.0 | 3.72e-01 | 98.8% | 40.8% |
| 3808217 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.62 | 47.0 | 4.17e-01 | 91.4% | 55.8% |
| 3321109 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 4.38e-01 | 100.0% | 55.6% |
| 3443424 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 48.0 | 3.22e-01 | 100.0% | 21.2% |
| 3818652 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.60 | 49.0 | 4.38e-01 | 97.5% | 63.5% |
| 3816589 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.60 | 53.0 | 3.34e-01 | 100.0% | 20.3% |
| 3804338 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.59 | 52.0 | 3.02e-01 | 97.5% | 10.7% |
| 3613953 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 53.0 | 3.70e-01 | 100.0% | 41.6% |
| 3302660 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.58 | 47.0 | 3.49e-01 | 100.0% | 33.6% |
| 3422006 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.55 | 47.0 | 3.45e-01 | 97.5% | 45.8% |
| 1495169 | 109.4.1.272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Yme1-like_N | 0.55 | 44.0 | 4.29e-01 | 98.8% | 81.8% |
| 3172828 | 109.59.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Clathrin-link, Clathrin_H_link | 0.54 | 43.0 | 3.41e-01 | 88.9% | 50.9% |
| 3645651 | 109.59.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Clathrin_H_link | 0.54 | 47.0 | 3.68e-01 | 97.5% | 48.8% |
| 3306102 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.53 | 45.0 | 3.12e-01 | 100.0% | 27.3% |
| 3223407 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.86e-01 | 100.0% | 59.3% |
| 3435332 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.52 | 44.0 | 3.39e-01 | 98.8% | 53.2% |
D6
medium
residues 526-587
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.82 | 71.0 | 6.02e-01 | 95.2% | 84.0% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.78 | 65.0 | 5.53e-01 | 91.9% | 64.4% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.75 | 60.0 | 5.19e-01 | 88.7% | 63.3% |
| 5z2mB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 67.0 | 5.17e-01 | 100.0% | 54.0% |
| 1konA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.73 | 48.0 | 4.65e-01 | 71.0% | 61.8% |
| 3lvyE01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.71 | 50.0 | 3.63e-01 | 98.4% | 27.9% |
| 4m8kA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.68 | 58.0 | 4.09e-01 | 100.0% | 92.5% |
| 3do6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 57.0 | 3.67e-01 | 98.4% | 77.1% |
| 5h28A02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.67 | 58.0 | 4.84e-01 | 100.0% | 67.0% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 44.0 | 4.69e-01 | 82.3% | 83.0% |
| 1vbkA02 | 3.30.2300.10 | Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily | 0.63 | 46.0 | 4.28e-01 | 80.6% | 74.4% |
| 2h4aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 46.0 | 3.62e-01 | 80.6% | 47.5% |
| 6bogA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 47.0 | 3.35e-01 | 83.9% | 61.2% |
| 3ayvD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 51.0 | 3.53e-01 | 98.4% | 63.1% |
| 3i6iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 51.0 | 3.76e-01 | 100.0% | 65.9% |
| 3a11B02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.59 | 49.0 | 3.53e-01 | 98.4% | 30.5% |
| 3varA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.59 | 48.0 | 3.22e-01 | 100.0% | 66.8% |
| 2y4tB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 50.0 | 3.20e-01 | 100.0% | 29.6% |
| 2p58C00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 4.14e-01 | 100.0% | 87.5% |
| 2q74A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.57 | 40.0 | 3.18e-01 | 74.2% | 53.5% |
| 4ljkG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 47.0 | 3.39e-01 | 100.0% | 76.1% |
| 2p6nA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.55e-01 | 100.0% | 76.9% |
| 3crvA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.35e-01 | 100.0% | 67.0% |
| 2hyiC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.47e-01 | 100.0% | 74.3% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.36e-01 | 100.0% | 65.8% |
| 6h21A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 43.0 | 3.16e-01 | 100.0% | 29.9% |
| 2wmlA00 | 3.90.1480.20 | Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 | 0.52 | 42.0 | 2.85e-01 | 98.4% | 68.1% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.51 | 40.0 | 3.30e-01 | 87.1% | 58.0% |
| 3hsqA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.51 | 35.0 | 3.46e-01 | 72.6% | 67.6% |
| 2do9A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 34.0 | 3.13e-01 | 93.5% | 52.4% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971674 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.84 | 70.0 | 6.43e-01 | 91.9% | 95.0% |
| 4999823 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.82 | 68.0 | 6.27e-01 | 91.9% | 93.8% |
| 3796249 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.74 | 65.0 | 4.91e-01 | 100.0% | 51.3% |
| 3263693 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 65.0 | 4.40e-01 | 100.0% | 37.0% |
| 3577706 | 109.3.1.173 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, TRP_2, Ank_2, Ank_3 | 0.72 | 63.0 | 4.53e-01 | 100.0% | 56.2% |
| 3268744 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 60.0 | 3.62e-01 | 100.0% | 14.3% |
| 4997008 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.69 | 59.0 | 4.00e-01 | 98.4% | 56.1% |
| 5044891 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 55.0 | 3.47e-01 | 93.5% | 25.8% |
| 4955570 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 57.0 | 3.81e-01 | 98.4% | 51.2% |
| 4617115 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.65 | 55.0 | 3.57e-01 | 100.0% | 51.9% |
| 3419521 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 4.67e-01 | 100.0% | 65.2% |
| 5077947 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.62 | 54.0 | 4.47e-01 | 100.0% | 71.3% |
| 3716446 | 7507.1.1.1 ↗ | a/b three-layered sandwiches › Glutaminase/Asparaginase C-terminal domain › Glutaminase/Asparaginase C-terminal domain › Glutaminase/Asparaginase C-terminal domain › Asparaginase_C | 0.60 | 50.0 | 4.08e-01 | 98.4% | 66.2% |
| 4647209 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.60 | 50.0 | 3.58e-01 | 98.4% | 78.5% |
| 3604563 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.59 | 50.0 | 3.78e-01 | 100.0% | 76.4% |
| 3300451 | 2006.1.1.52 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PF28688 | 0.59 | 48.0 | 3.79e-01 | 100.0% | 48.4% |
| 3211723 | 300.1.1.11 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 | 0.58 | 49.0 | 3.44e-01 | 100.0% | 66.7% |
| 3595607 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 43.0 | 3.48e-01 | 82.3% | 43.8% |
| 4195422 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.58 | 49.0 | 3.95e-01 | 95.2% | 52.5% |
| 4954369 | 2003.1.1.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › OCD_Mu_crystall | 0.57 | 48.0 | 3.58e-01 | 98.4% | 36.6% |
| 5050439 | 7563.1.1.1 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › DNA_processg_A | 0.57 | 48.0 | 3.35e-01 | 100.0% | 72.3% |
| 4977279 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.57 | 48.0 | 3.89e-01 | 100.0% | 89.6% |
| 4969564 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 2.83e-01 | 100.0% | 39.4% |
| 3876764 | 2004.1.1.428 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 | 0.56 | 46.0 | 2.68e-01 | 100.0% | 17.6% |
| 5038715 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.55 | 45.0 | 3.20e-01 | 100.0% | 27.1% |
| 4956042 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.55 | 45.0 | 3.35e-01 | 100.0% | 53.8% |
| 4971779 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 45.0 | 3.23e-01 | 100.0% | 46.6% |
| 3274803 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.54 | 44.0 | 3.27e-01 | 100.0% | 62.5% |
| 4385604 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.54 | 46.0 | 2.91e-01 | 100.0% | 33.6% |
| 3711469 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.54 | 44.0 | 2.53e-01 | 100.0% | 24.1% |
| 4546376 | 3922.1.1.276 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › SMC_N, AAA_21 | 0.53 | 43.0 | 2.69e-01 | 100.0% | 68.3% |
| 3520123 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.53 | 43.0 | 3.45e-01 | 98.4% | 79.3% |
| 3603511 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.53 | 46.0 | 3.13e-01 | 100.0% | 50.6% |
| 3388874 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.53 | 43.0 | 3.47e-01 | 100.0% | 85.5% |
| None | — | 0.53 | 43.0 | 2.84e-01 | 100.0% | 50.0% | |
| 5045026 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.52 | 43.0 | 3.62e-01 | 98.4% | 55.8% |
| 4011185 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.52 | 43.0 | 2.85e-01 | 100.0% | 27.5% |
| 3715626 | 2004.1.1.240 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Utp25_C | 0.51 | 43.0 | 3.12e-01 | 100.0% | 40.5% |
| None | — | 0.50 | 41.0 | 2.82e-01 | 98.4% | 56.4% |
D7
medium
residues 588-686