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Ankyrin_repeat_domain_containing_protein

Euk-Vir

Pandoravirus_quercus

Ankyrin_repeat_domain_containing_protein__YP_009483588__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483588 ↗
Protein ID:
Ankyrin_repeat_domain_containing_protein
Kingdom:
euk

Quality

84.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (35 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 439-492
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13637.13 best Ank_4 27.3 4.90e-06 85.2% 100.0%
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.88 76.0 5.78e-01 92.6% 46.6%
1k1aA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 78.0 5.05e-01 100.0% 30.3%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 80.0 6.41e-01 100.0% 59.8%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 78.0 5.53e-01 100.0% 43.3%
2dznA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 76.0 4.92e-01 100.0% 30.1%
4qfvC02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 72.0 6.78e-01 94.4% 84.6%
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 73.0 4.91e-01 100.0% 33.2%
3lvqE02 1.25.40.950 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.77 65.0 5.92e-01 96.3% 87.8%
2fefA02 1.10.3920.10 Mainly Alpha › Orthogonal Bundle › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like 0.70 52.0 3.82e-01 83.3% 97.4%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.69 50.0 4.22e-01 77.8% 53.2%
2g6zA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.64 47.0 3.52e-01 81.5% 88.4%
1a22A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 45.0 3.16e-01 79.6% 38.9%
4ezbA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.59 45.0 3.65e-01 87.0% 76.9%
2jrmA00 1.10.10.620 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain 0.59 43.0 4.19e-01 79.6% 75.0%
7dl9A01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.59 42.0 2.97e-01 77.8% 34.5%
4l0cA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 43.0 2.77e-01 77.8% 53.5%
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.58 47.0 4.06e-01 100.0% 69.1%
1sy7A02 1.20.1370.20 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain 0.58 40.0 3.87e-01 81.5% 64.1%
1yiqA02 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.57 39.0 3.27e-01 74.1% 65.1%
4gtnA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 45.0 4.23e-01 100.0% 86.5%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 40.0 3.06e-01 81.5% 69.3%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.55 38.0 3.36e-01 79.6% 81.4%
3bh1A02 1.20.1570.10 Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like 0.53 42.0 3.65e-01 100.0% 94.1%
1ki1B01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.53 42.0 3.04e-01 100.0% 60.3%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.52 43.0 4.08e-01 98.1% 86.6%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.38e-01 81.5% 52.9%
4f3xA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 42.0 2.77e-01 100.0% 86.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260808 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.93 86.0 5.33e-01 100.0% 21.2%
3254402 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.86 76.0 5.65e-01 100.0% 42.2%
3276619 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.85 76.0 4.39e-01 100.0% 12.9%
3381999 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.84 75.0 5.19e-01 100.0% 37.1%
3727990 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 73.0 4.70e-01 100.0% 31.4%
3976077 5059.1.1.20 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › DUF1422 0.78 58.0 4.51e-01 79.6% 64.3%
3651730 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.73 64.0 4.79e-01 100.0% 50.4%
4191 4079.1.1.1 ↗ alpha bundles › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like › PoNi_C 0.70 52.0 3.82e-01 83.3% 97.4%
3458691 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.68 57.0 4.32e-01 100.0% 42.8%
3671587 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.68 59.0 4.21e-01 100.0% 42.9%
3656431 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.67 59.0 3.47e-01 100.0% 16.0%
3684300 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.67 57.0 3.76e-01 100.0% 26.3%
3443426 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.63 53.0 3.99e-01 100.0% 38.0%
4545627 109.4.1.604 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PET122 0.63 53.0 3.78e-01 100.0% 36.7%
3448042 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.61 51.0 3.07e-01 100.0% 12.9%
3398005 633.22.1.1 ↗ alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › VKOR 0.55 41.0 3.14e-01 87.0% 55.2%
4515233 5059.1.1.18 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UPF0060 0.53 37.0 3.11e-01 79.6% 68.2%
3397629 101.1.17.46 ↗ alpha arrays › HTH › HTH › FF domain › DUF4771 0.52 36.0 3.45e-01 74.1% 95.4%
D2 medium residues 493-558
PDB
Domain cluster: rep: Ankyrin_repeat_domain_containing_protein__YP_009483589__Pandoravirus_quercus__2107709__D485-561