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Ankyrin_repeat_domain_containing_protein
Euk-VirPandoravirus_quercus
Ankyrin_repeat_domain_containing_protein__YP_009483615__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483615 ↗
- Protein ID:
- Ankyrin_repeat_domain_containing_protein
- Kingdom:
- euk
Quality
86.0
mean pLDDT
Cluster
View cluster (144 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-104
Domain cluster:
rep: ankyrin_repeat_domain__YP_008438187__Pandoravirus_salinus__1349410__D1-80
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 31.7 | 1.40e-07 | 48.5% | 95.7% |
| PF00646.39 | F-box | 28.8 | 1.20e-06 | 39.6% | 88.4% |
D2
medium
residues 550-605
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.72 | 59.0 | 5.30e-01 | 91.1% | 96.2% |
| 7uvpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 3.35e-01 | 100.0% | 33.6% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 47.0 | 3.91e-01 | 94.6% | 82.9% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 41.0 | 3.74e-01 | 76.8% | 86.9% |
| 2pljA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.59 | 49.0 | 3.38e-01 | 100.0% | 49.3% |
| 6wgyA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.55 | 43.0 | 3.71e-01 | 94.6% | 84.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3332417 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.71 | 60.0 | 3.66e-01 | 96.4% | 18.6% |
| 3603396 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 56.0 | 3.36e-01 | 100.0% | 15.1% |
| 3826292 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.66 | 53.0 | 4.16e-01 | 92.9% | 46.9% |
| 3373402 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.66 | 55.0 | 4.27e-01 | 100.0% | 51.4% |
| 3822409 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.65 | 54.0 | 4.11e-01 | 100.0% | 51.3% |
| 3440587 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.64 | 53.0 | 3.92e-01 | 100.0% | 45.9% |
| 3425838 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.63 | 54.0 | 3.61e-01 | 100.0% | 33.9% |
| 3666211 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.61 | 51.0 | 3.94e-01 | 100.0% | 65.0% |
| 3374491 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.59 | 50.0 | 3.93e-01 | 100.0% | 57.7% |