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Ankyrin_repeat_domain_containing_protein

Euk-Vir

Pandoravirus_quercus

Ankyrin_repeat_domain_containing_protein__YP_009483642__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483642 ↗
Protein ID:
Ankyrin_repeat_domain_containing_protein
Kingdom:
euk

Quality

81.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

View cluster (103 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-64
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009482647__Pandoravirus_neocaledonia__2107708__D28-75
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 24.9 2.00e-05 77.5% 72.3%
PF00646.39 F-box 22.8 9.10e-05 75.5% 79.1%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.86 60.0 6.72e-01 83.7% 94.7%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.82 66.0 4.03e-01 87.8% 16.2%
4e12A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.59 47.0 4.14e-01 100.0% 87.4%
3d5lA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.57e-01 93.9% 100.0%
2qkmB01 1.10.10.1050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dcp2, box A domain 0.55 44.0 3.63e-01 95.9% 68.6%
1te4A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 42.0 3.53e-01 87.8% 48.3%
8sbeA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.54 40.0 2.88e-01 91.8% 67.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3818983 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 65.0 7.11e-01 77.6% 92.5%
3470594 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 69.0 6.61e-01 83.7% 72.7%
3304043 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.89 64.0 6.93e-01 77.6% 92.5%
3618416 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 65.0 7.07e-01 83.7% 95.0%
3544561 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 75.0 6.19e-01 98.0% 55.0%
3617100 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 66.0 5.95e-01 93.9% 60.0%
3524044 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 64.0 6.70e-01 81.6% 84.4%
3806207 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 64.0 6.91e-01 83.7% 95.0%
3807195 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 71.0 6.24e-01 89.8% 61.4%
3827758 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.86 73.0 4.31e-01 91.8% 23.1%
3854698 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.86 73.0 4.20e-01 91.8% 17.2%
3817998 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 72.0 4.46e-01 91.8% 29.0%
3669426 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 66.0 6.94e-01 89.8% 95.3%
3417160 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 66.0 5.23e-01 89.8% 43.2%
4879175 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 72.0 6.52e-01 98.0% 70.3%
3339201 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 63.0 6.55e-01 81.6% 86.7%
3751898 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.85 62.0 5.42e-01 83.7% 54.3%
3311102 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 63.0 6.84e-01 89.8% 97.5%
3843694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 62.0 4.08e-01 83.7% 21.2%
3995930 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 64.0 5.80e-01 89.8% 61.5%
3865783 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.84 71.0 3.87e-01 91.8% 10.1%
3537637 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 70.0 4.27e-01 91.8% 24.2%
3812507 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 67.0 5.37e-01 93.9% 46.2%
3643098 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 59.0 5.67e-01 81.6% 67.3%
3440864 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 62.0 6.18e-01 81.6% 80.0%
3423604 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 62.0 6.22e-01 83.7% 80.0%
3389442 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 60.0 6.23e-01 81.6% 84.4%
2860146 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 58.0 5.69e-01 83.7% 69.8%
3320433 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 66.0 6.22e-01 93.9% 73.3%
2420136 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 58.0 5.68e-01 81.6% 69.8%
3465759 207.1.1.99 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 0.81 68.0 4.23e-01 91.8% 30.8%
3423552 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 67.0 4.39e-01 91.8% 37.6%
3274776 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 67.0 5.36e-01 93.9% 47.4%
3924438 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 66.0 6.39e-01 91.8% 80.0%
3726840 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 5.68e-01 93.9% 58.7%
3434120 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 55.0 5.93e-01 77.6% 89.7%
3448066 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 5.29e-01 91.8% 78.9%
3399970 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.79 65.0 4.04e-01 89.8% 17.9%
3825072 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.79 66.0 3.98e-01 91.8% 29.3%
3276410 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 64.0 5.38e-01 93.9% 52.9%
3309661 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 62.0 5.30e-01 89.8% 53.8%
3991559 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 67.0 6.25e-01 95.9% 78.3%
3539114 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.78 63.0 4.05e-01 87.8% 32.4%
3204329 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 63.0 4.93e-01 93.9% 42.9%
4073598 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 64.0 5.88e-01 93.9% 70.8%
3915884 145.1.1.32 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 0.77 62.0 4.33e-01 87.8% 46.9%
4160836 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 62.0 3.71e-01 87.8% 22.7%
3810013 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 65.0 5.93e-01 93.9% 89.1%
None — 0.76 64.0 3.79e-01 95.9% 27.6%
3939710 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 65.0 5.86e-01 93.9% 73.8%
3299681 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 57.0 5.67e-01 93.9% 80.0%
3819371 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 61.0 5.92e-01 91.8% 80.0%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 52.0 5.55e-01 81.6% 90.0%
3632792 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 62.0 6.16e-01 91.8% 92.0%
3725732 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 62.0 5.29e-01 93.9% 57.5%
3727492 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 53.0 5.54e-01 81.6% 84.4%
3187719 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 61.0 5.36e-01 93.9% 64.0%
3640174 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 57.0 4.99e-01 93.9% 57.3%
3448206 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 54.0 5.25e-01 89.8% 74.5%
3319774 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 58.0 5.09e-01 93.9% 85.3%
3685862 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.68 53.0 5.36e-01 91.8% 88.0%
4049448 185.1.1.1 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.57 42.0 3.62e-01 83.7% 58.9%
3590013 2003.1.1.37 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C 0.50 34.0 2.42e-01 85.7% 19.5%