Back to structures

As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00006

Bact-Vir

As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00006

Identity

Kingdom:
phage

Quality

80.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 160-249
PDB
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.74 51.0 5.19e-01 84.4% 72.2%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.73 52.0 5.67e-01 84.4% 93.0%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.71 56.0 5.59e-01 84.4% 98.9%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.71 56.0 5.59e-01 84.4% 92.3%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 53.0 3.40e-01 84.4% 17.1%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 53.0 5.65e-01 83.3% 97.3%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.70 52.0 5.18e-01 77.8% 87.0%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 48.0 3.98e-01 71.1% 50.0%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 54.0 5.51e-01 85.6% 90.8%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.69 54.0 5.13e-01 84.4% 77.4%
1krhA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 54.0 5.33e-01 85.6% 97.9%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 53.0 5.11e-01 84.4% 91.3%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.68 51.0 3.79e-01 83.3% 31.4%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 50.0 4.83e-01 77.8% 79.6%
1aw8B00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 46.0 4.65e-01 71.1% 72.5%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 53.0 5.58e-01 84.4% 100.0%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.67 52.0 5.42e-01 84.4% 100.0%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.66 52.0 5.49e-01 83.3% 100.0%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 51.0 5.08e-01 84.4% 96.8%
2f1lA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.66 51.0 5.17e-01 84.4% 89.9%
2wyrB02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.65 51.0 5.24e-01 84.4% 100.0%
4x8iA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.65 50.0 5.18e-01 84.4% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 41.0 4.72e-01 73.3% 89.1%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 50.0 4.82e-01 84.4% 97.1%
1qfjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 51.0 5.12e-01 85.6% 94.5%
3kw3B01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.63 51.0 4.35e-01 87.8% 64.6%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.63 51.0 5.06e-01 88.9% 88.2%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 49.0 4.68e-01 85.6% 91.5%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 45.0 4.24e-01 74.4% 76.4%
2zuoA08 2.30.30.620 Mainly Beta › Roll › SH3 type barrels. › 0.63 33.0 3.90e-01 77.8% 75.9%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 45.0 4.65e-01 77.8% 80.5%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.62 49.0 4.89e-01 84.4% 100.0%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.62 42.0 4.22e-01 72.2% 69.2%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 44.0 4.51e-01 75.6% 80.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 40.0 4.43e-01 96.7% 82.2%
6hhuA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 44.0 4.64e-01 80.0% 88.5%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.61 47.0 4.42e-01 85.6% 79.1%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.60 45.0 3.89e-01 80.0% 60.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 37.0 4.52e-01 83.3% 100.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.11e-01 96.7% 73.8%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.56e-01 82.2% 91.3%
1vhkA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.60 46.0 5.03e-01 98.9% 100.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 37.0 4.44e-01 85.6% 95.2%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 40.0 3.95e-01 71.1% 73.7%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.58 51.0 4.77e-01 98.9% 99.1%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 4.09e-01 78.9% 78.8%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 4.12e-01 71.1% 85.3%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.46e-01 96.7% 86.3%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.56 43.0 3.39e-01 84.4% 41.0%
2v4dE01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.56 41.0 4.20e-01 77.8% 82.1%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.56 43.0 4.04e-01 84.4% 67.9%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 42.0 4.14e-01 82.2% 77.1%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 4.21e-01 83.3% 97.7%
2ww8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 3.41e-01 78.9% 55.7%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.54 45.0 4.27e-01 94.4% 85.6%
3lzqA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.54 41.0 3.47e-01 83.3% 72.0%
3ne5B01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.53 45.0 4.58e-01 100.0% 100.0%
4wtxA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.91e-01 84.4% 87.6%
2xtsA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.47e-01 83.3% 66.9%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 42.0 3.59e-01 88.9% 78.0%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4217174 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.85 60.0 6.76e-01 84.4% 94.3%
4026674 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.81 62.0 6.61e-01 84.4% 91.3%
3696719 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.78 63.0 5.63e-01 84.4% 94.2%
5043827 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 62.0 5.29e-01 85.6% 98.6%
4890345 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 58.0 5.93e-01 84.4% 83.5%
4080130 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 57.0 6.12e-01 83.3% 93.3%
4194551 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 55.0 5.93e-01 84.4% 90.7%
4125814 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 55.0 5.94e-01 84.4% 90.7%
4166012 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 57.0 6.14e-01 84.4% 94.7%
3171334 1.1.7.102 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF28793 0.76 61.0 5.69e-01 85.6% 97.3%
3904189 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 57.0 5.50e-01 84.4% 71.0%
4060488 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 55.0 5.76e-01 84.4% 85.0%
4350337 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 56.0 6.07e-01 84.4% 94.7%
4011239 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 57.0 5.96e-01 84.4% 88.7%
4943366 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 58.0 5.92e-01 84.4% 85.9%
4402716 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.75 57.0 5.87e-01 85.6% 84.7%
4197746 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.75 55.0 5.64e-01 84.4% 81.2%
4245518 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.75 54.0 5.81e-01 84.4% 90.7%
4162532 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.75 55.0 5.95e-01 84.4% 93.3%
4266069 1.1.7.88 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.75 57.0 5.46e-01 81.1% 100.0%
4083044 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.75 56.0 5.99e-01 84.4% 94.7%
4072524 1.1.7.88 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.75 63.0 5.91e-01 91.1% 91.8%
4066146 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 55.0 5.25e-01 84.4% 66.7%
5056905 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.75 59.0 5.96e-01 84.4% 100.0%
4403870 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.74 55.0 5.43e-01 84.4% 73.7%
3605269 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 59.0 5.72e-01 84.4% 96.0%
4197108 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 56.0 5.62e-01 85.6% 78.9%
4391878 1.1.7.88 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.74 63.0 5.18e-01 91.1% 78.1%
3970513 1.1.7.87 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.74 58.0 6.02e-01 84.4% 97.6%
1790393 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 56.0 5.89e-01 94.4% 90.2%
4636885 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.73 54.0 5.85e-01 84.4% 96.0%
4452870 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.73 58.0 5.83e-01 84.4% 91.1%
5023511 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.72 57.0 5.29e-01 85.6% 98.3%
4660673 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.72 55.0 5.69e-01 84.4% 87.1%
3945528 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 54.0 5.73e-01 84.4% 91.3%
4519111 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.71 56.0 5.64e-01 84.4% 91.1%
3801941 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.71 52.0 4.77e-01 76.7% 87.8%
4947671 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 54.0 5.70e-01 81.1% 100.0%
5052888 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 63.0 5.61e-01 96.7% 90.4%
4518787 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 53.0 5.70e-01 84.4% 97.3%
3971620 1.1.7.88 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.70 58.0 4.86e-01 88.9% 80.0%
4072878 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 53.0 5.60e-01 84.4% 92.5%
3724971 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 62.0 5.77e-01 94.4% 90.9%
4542543 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.70 56.0 5.23e-01 85.6% 86.4%
5069810 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.69 52.0 5.57e-01 78.9% 90.0%
4981726 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 53.0 5.35e-01 82.2% 97.8%
4946268 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 53.0 5.24e-01 82.2% 94.7%
2161972 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 53.0 5.52e-01 84.4% 89.2%
1567470 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.69 53.0 5.20e-01 82.2% 91.8%
4521518 1.1.7.121 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 0.68 53.0 4.90e-01 83.3% 69.6%
4108039 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.68 48.0 4.94e-01 73.3% 78.8%
3574784 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 60.0 5.56e-01 94.4% 80.0%
2642985 1.1.7.8 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae 0.68 52.0 5.35e-01 83.3% 100.0%
4391995 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.68 53.0 5.44e-01 84.4% 96.5%
4060133 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.68 59.0 5.97e-01 94.4% 94.4%
4978554 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 53.0 5.13e-01 84.4% 86.0%
5041917 1.1.7.8 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae 0.67 52.0 5.27e-01 84.4% 95.6%
4163756 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 52.0 5.16e-01 85.6% 88.4%
3178145 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 51.0 4.38e-01 84.4% 70.7%
4399542 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 52.0 5.27e-01 85.6% 90.0%
3504760 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.65 47.0 4.79e-01 76.7% 80.0%
3966626 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 52.0 5.23e-01 86.7% 91.1%
4959331 1.1.7.27 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF1905 0.64 49.0 5.11e-01 81.1% 100.0%
3507338 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 40.0 4.80e-01 93.3% 95.0%
4347919 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.63 50.0 5.05e-01 85.6% 85.6%
4948286 1.1.7.22 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_M42 0.63 50.0 4.92e-01 86.7% 100.0%
3939997 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.62 45.0 4.53e-01 76.7% 76.7%
3222051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.71e-01 88.9% 93.8%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.62 43.0 4.90e-01 80.0% 100.0%
4519252 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.61 53.0 4.88e-01 96.7% 100.0%
3428486 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 43.0 4.61e-01 75.6% 98.8%
3649741 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.60 38.0 4.17e-01 74.4% 77.3%
3501699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 40.0 4.22e-01 96.7% 77.5%
3502086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 36.0 4.32e-01 76.7% 100.0%
4204514 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.58 46.0 4.58e-01 87.8% 85.3%
127 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.58 51.0 4.87e-01 100.0% 99.1%
5043602 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.55e-01 87.8% 85.3%
3326980 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 38.0 4.44e-01 71.1% 100.0%
3519597 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 42.0 4.16e-01 97.8% 72.6%
4317035 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 41.0 4.20e-01 96.7% 80.0%
3254695 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.56 42.0 4.16e-01 83.3% 77.9%
3688068 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.56 39.0 3.28e-01 85.6% 43.3%
3492016 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.55 40.0 4.06e-01 75.6% 78.9%
3513834 11.1.1.260 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 0.54 42.0 4.00e-01 85.6% 81.8%
1558582 5092.1.1.6 beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fiber_head_BAdV-4 0.54 42.0 3.91e-01 84.4% 67.8%
3971760 1.1.7.80 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C 0.54 41.0 4.30e-01 83.3% 92.5%
3935249 11.1.1.955 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th 0.53 41.0 4.06e-01 85.6% 83.0%
4442722 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.53 40.0 3.93e-01 83.3% 83.0%
3294392 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.53 36.0 3.72e-01 73.3% 74.1%
4346055 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.52 40.0 3.08e-01 84.4% 37.3%
3923581 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.87e-01 85.6% 87.0%
5009953 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.51 40.0 3.08e-01 84.4% 47.8%
D2 medium residues 255-265_292-302_342-371_441-455
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hx6B01 2.70.9.30 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 0.69 60.0 4.18e-01 100.0% 91.0%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.42e-01 98.5% 67.2%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.65e-01 100.0% 89.7%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.31e-01 97.0% 76.5%
3w5mA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 47.0 4.00e-01 98.5% 95.8%
3t30C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.56 48.0 4.36e-01 100.0% 98.9%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 50.0 3.18e-01 100.0% 83.2%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.41e-01 100.0% 80.4%
7dfqA01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 44.0 3.64e-01 92.5% 79.8%
4zrxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 42.0 3.67e-01 89.6% 97.1%
1s7iA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.52 38.0 3.23e-01 82.1% 95.2%
1oi6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.20e-01 100.0% 36.1%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.50 43.0 3.58e-01 100.0% 64.3%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2995199 10.2.1.41 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_NCLDV 0.60 51.0 3.82e-01 100.0% 95.7%
5045352 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 49.0 4.26e-01 91.0% 100.0%
140027 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.58 49.0 3.42e-01 98.5% 67.2%
3472901 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 44.0 3.65e-01 98.5% 100.0%
3258386 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 43.0 3.64e-01 92.5% 93.0%
3994747 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.52 45.0 3.68e-01 100.0% 70.8%
3586909 12.1.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C 0.51 44.0 3.60e-01 98.5% 63.1%
1412423 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.51 44.0 3.65e-01 100.0% 70.1%
4029335 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.51 44.0 4.31e-01 98.5% 98.7%
3309020 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 45.0 3.68e-01 100.0% 73.6%
4966023 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.51 42.0 3.58e-01 100.0% 75.2%
3526370 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.50 44.0 3.67e-01 100.0% 74.2%
5081776 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 44.0 3.68e-01 100.0% 59.2%
D3 medium residues 266-291_303-341_372-440
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 3.88e-01 70.1% 79.0%
4r4xA02 2.60.120.1570 Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain 0.64 44.0 3.93e-01 70.1% 93.1%
3ks7A01 2.60.120.1570 Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain 0.63 43.0 3.72e-01 70.1% 89.2%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 43.0 3.83e-01 70.1% 80.6%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 42.0 3.63e-01 70.1% 80.3%
4j5tA01 2.70.98.110 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycosyl hydrolase family 63, N-terminal domain 0.60 42.0 3.20e-01 71.6% 54.8%
4p02B01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 41.0 4.12e-01 70.1% 92.5%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 40.0 3.85e-01 70.1% 96.8%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 40.0 4.25e-01 70.1% 96.6%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 39.0 3.82e-01 70.1% 93.8%
4xvhA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 40.0 4.42e-01 92.5% 90.7%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 38.0 3.77e-01 70.1% 96.6%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.56 44.0 4.73e-01 91.8% 95.7%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 4.49e-01 80.6% 96.1%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 38.0 3.81e-01 70.1% 84.1%
3e7jA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 38.0 2.92e-01 70.9% 88.4%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.95e-01 79.9% 93.2%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 36.0 3.96e-01 70.1% 80.7%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 32.0 3.88e-01 78.4% 90.9%
2q2eB05 2.60.40.2960 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 33.0 3.89e-01 94.8% 91.2%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 35.0 3.55e-01 83.6% 65.9%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.53 36.0 3.94e-01 70.1% 95.5%
2zoeB02 2.60.120.1080 Mainly Beta › Sandwich › Jelly Rolls › 0.53 36.0 3.50e-01 70.1% 71.7%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 4.03e-01 82.1% 98.6%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.52 38.0 3.93e-01 79.1% 81.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 38.0 3.52e-01 79.9% 86.9%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.50 38.0 3.40e-01 79.1% 74.7%
4i3gA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.50 31.0 3.44e-01 94.0% 76.6%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 42.0 4.40e-01 95.5% 95.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3841027 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.59 41.0 3.89e-01 70.1% 88.4%
3889465 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 40.0 4.31e-01 70.1% 91.3%
3625197 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.58 40.0 3.69e-01 70.1% 85.9%
3930491 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.58 44.0 4.85e-01 79.1% 97.3%
5040751 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 39.0 4.22e-01 70.1% 92.7%
3229198 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.56 44.0 4.61e-01 83.6% 100.0%
2326112 10.32.1.56 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CE2_N 0.56 40.0 4.42e-01 90.3% 90.7%
3222920 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.56 45.0 4.55e-01 85.8% 91.0%
3285709 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 51.0 4.85e-01 100.0% 95.5%
3916503 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.55 45.0 4.15e-01 87.3% 98.8%
3449091 10.12.1.9 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC 0.55 43.0 3.63e-01 82.8% 67.1%
5057219 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 36.0 4.07e-01 97.8% 87.5%
4945638 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 34.0 4.04e-01 70.1% 93.3%
3272798 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.54 42.0 4.20e-01 81.3% 100.0%
3659804 10.12.1.52 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 0.54 41.0 4.12e-01 79.1% 100.0%
3744879 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 40.0 4.33e-01 77.6% 96.4%
3208937 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 39.0 4.25e-01 76.1% 96.4%
4928383 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 35.0 4.18e-01 81.3% 100.0%
5053195 10.12.1.98 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.53 37.0 3.81e-01 95.5% 75.2%
3875305 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 41.0 2.62e-01 82.1% 23.6%
3623050 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.53 40.0 4.29e-01 78.4% 93.9%
3749229 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.53 41.0 3.64e-01 82.1% 95.8%
3529423 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 36.0 3.70e-01 70.1% 92.3%
3600520 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 29.0 3.64e-01 77.6% 90.0%
3893737 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.52 46.0 4.29e-01 97.0% 93.5%
3801498 10.12.1.101 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 0.52 40.0 3.44e-01 82.1% 60.0%
5082908 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 36.0 3.94e-01 70.1% 93.5%
4668207 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 4.12e-01 100.0% 85.4%
4931128 11.1.1.257 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Top6b_C 0.51 35.0 3.74e-01 98.5% 80.9%
5044223 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 36.0 4.08e-01 86.6% 99.0%
3484435 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.51 45.0 4.35e-01 97.0% 99.3%
3172077 10.32.1.238 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 0.50 44.0 4.29e-01 94.0% 97.9%
D4 medium residues 456-490_571-676
PDB
D5 medium residues 491-570
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.70 52.0 5.29e-01 78.8% 100.0%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.67 60.0 5.68e-01 100.0% 91.5%
1i8dC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 55.0 5.40e-01 100.0% 83.0%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.66 58.0 5.48e-01 98.8% 92.8%
1kzlA02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 59.0 5.47e-01 100.0% 81.2%
2nv4A00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.66 56.0 4.86e-01 98.8% 89.4%
2lp6A00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.65 58.0 5.58e-01 100.0% 93.4%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 58.0 5.52e-01 100.0% 86.2%
1kk1A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 59.0 5.24e-01 100.0% 91.9%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.64 55.0 5.40e-01 96.2% 100.0%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.64 55.0 5.31e-01 96.2% 100.0%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 57.0 5.58e-01 100.0% 91.0%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 57.0 5.46e-01 100.0% 87.0%
3okxB00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.64 55.0 4.59e-01 100.0% 79.2%
3a35A01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 56.0 5.39e-01 100.0% 87.0%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 56.0 4.78e-01 100.0% 67.2%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 56.0 5.43e-01 100.0% 92.1%
4beuA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.62 55.0 4.30e-01 100.0% 50.3%
1a3wB03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.62 54.0 5.13e-01 100.0% 91.8%
3oo2A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.62 55.0 4.47e-01 100.0% 55.3%
7m0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 4.57e-01 97.5% 83.3%
2cxkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.69e-01 100.0% 81.6%
3mlpA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 3.90e-01 100.0% 51.1%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.59 51.0 4.25e-01 100.0% 57.4%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 51.0 4.51e-01 100.0% 90.2%
4k35A02 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.58 46.0 3.56e-01 91.3% 67.2%
4dyoA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.58 49.0 4.22e-01 100.0% 98.6%
1z85A01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.57 42.0 4.51e-01 88.7% 94.0%
5l56A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 4.46e-01 97.5% 82.1%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.57 41.0 4.04e-01 98.8% 71.1%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.57 50.0 4.01e-01 100.0% 52.8%
2bhuA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.56e-01 95.0% 60.4%
1xppD00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.54 43.0 4.02e-01 96.2% 69.3%
5jtwA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 4.39e-01 100.0% 86.3%
4xvoA01 2.60.40.3710 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 4.37e-01 98.8% 86.5%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 45.0 3.90e-01 100.0% 92.6%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 44.0 4.35e-01 96.2% 97.7%
4aeeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.85e-01 97.5% 71.1%
5f7uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.07e-01 100.0% 85.6%
1o75A04 2.60.40.1270 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain D 0.51 37.0 3.77e-01 100.0% 80.5%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 38.0 3.78e-01 91.3% 76.5%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838931 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 56.0 5.89e-01 97.5% 98.6%
4379635 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.68 61.0 5.81e-01 100.0% 93.7%
4994399 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.68 61.0 5.74e-01 98.8% 92.6%
4949140 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.68 59.0 5.81e-01 98.8% 98.9%
4283757 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.68 59.0 4.86e-01 98.8% 79.9%
3396811 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.68 60.0 5.63e-01 100.0% 93.0%
4954732 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.68 60.0 5.84e-01 100.0% 94.4%
4980898 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 60.0 5.61e-01 100.0% 95.0%
4232738 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.67 60.0 5.30e-01 100.0% 78.3%
5057245 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.67 60.0 5.82e-01 100.0% 91.1%
3415703 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.66 59.0 5.62e-01 100.0% 95.8%
4602848 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.66 57.0 5.56e-01 100.0% 85.6%
3404531 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.66 59.0 5.40e-01 100.0% 93.3%
98 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.66 60.0 5.29e-01 100.0% 73.5%
4055490 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.66 59.0 5.72e-01 100.0% 90.0%
4984743 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.65 57.0 5.40e-01 97.5% 91.6%
3164576 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.65 58.0 5.27e-01 100.0% 75.2%
4573862 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.65 58.0 5.34e-01 100.0% 77.1%
3386643 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.65 58.0 5.33e-01 100.0% 77.1%
376641 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.64 58.0 5.51e-01 100.0% 86.0%
4238792 1.1.7.5 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.64 58.0 5.32e-01 100.0% 78.1%
5041126 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.64 57.0 5.44e-01 100.0% 92.6%
3259430 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.64 47.0 4.82e-01 97.5% 82.7%
3268936 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 48.0 4.97e-01 100.0% 88.0%
3263990 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 47.0 4.76e-01 100.0% 82.5%
3251646 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.62 46.0 4.65e-01 98.8% 80.0%
3260243 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 50.0 4.99e-01 100.0% 83.5%
4033321 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.62 55.0 4.78e-01 100.0% 68.0%
3268444 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.61 46.0 3.48e-01 100.0% 31.7%
3266894 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.61 48.0 4.74e-01 100.0% 81.2%
3250080 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.60 43.0 4.24e-01 100.0% 70.0%
4395659 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.60 52.0 4.26e-01 100.0% 54.8%
3267060 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.60 47.0 4.77e-01 100.0% 87.5%
3261758 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 4.67e-01 100.0% 82.4%
3457999 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.53e-01 100.0% 66.1%
4209875 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.59 52.0 4.43e-01 100.0% 63.0%
3270888 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.59 49.0 4.94e-01 97.5% 91.3%
3257691 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.59 47.0 4.53e-01 100.0% 77.8%
3246056 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 45.0 4.23e-01 100.0% 68.0%
3274752 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 45.0 4.44e-01 95.0% 80.0%
3270392 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.58 45.0 4.49e-01 100.0% 81.2%
3331314 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.57e-01 100.0% 72.4%
3830010 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.58 49.0 4.56e-01 98.8% 75.0%
3538426 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.58 44.0 4.27e-01 100.0% 72.6%
3250349 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.46e-01 100.0% 76.8%
3508187 11.1.1.892 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_F54D1_6 0.57 43.0 4.28e-01 97.5% 78.8%
3648215 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 45.0 4.25e-01 100.0% 72.0%
3936013 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 4.30e-01 98.8% 75.8%
3260082 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.64e-01 96.2% 90.0%
3759348 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 44.0 4.51e-01 100.0% 94.7%
3248012 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 47.0 4.50e-01 100.0% 80.0%
3533645 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 44.0 4.28e-01 100.0% 78.9%
3330358 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 45.0 4.05e-01 97.5% 61.7%
3255349 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 42.0 3.81e-01 100.0% 59.1%
3247908 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.05e-01 97.5% 82.7%
3759362 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.54 41.0 4.13e-01 100.0% 83.7%
3990462 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 39.0 3.17e-01 77.5% 81.9%
3269636 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.54 40.0 3.80e-01 100.0% 66.0%
5029881 310.3.1.26 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HVO_2525_N 0.54 47.0 3.91e-01 98.8% 66.2%
3268441 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 4.42e-01 100.0% 86.7%
3273261 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.28e-01 98.8% 88.7%
3262826 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.53 44.0 4.28e-01 100.0% 82.1%
3915618 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 2.74e-01 100.0% 12.1%
3513302 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.53 45.0 4.18e-01 97.5% 88.6%
3905914 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.53 44.0 4.03e-01 95.0% 80.0%
5029615 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.45e-01 100.0% 44.1%
3922010 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 46.0 4.29e-01 100.0% 85.0%
5047326 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.52 44.0 4.32e-01 96.2% 96.7%
4978953 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 4.24e-01 100.0% 83.0%
3777877 189.1.1.3 alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › Plexin_cytopl 0.52 44.0 2.71e-01 98.8% 13.6%
3619929 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 4.32e-01 100.0% 88.4%
3765958 189.1.1.0 alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP 0.52 45.0 2.76e-01 98.8% 15.9%
1863 11.1.5.19 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adhesin_Dr 0.52 45.0 3.79e-01 100.0% 89.3%
3573381 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 45.0 4.14e-01 100.0% 85.7%
5068206 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.00e-01 98.8% 72.7%
3280488 11.1.1.250 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_10 0.51 43.0 4.29e-01 100.0% 90.6%
3888091 11.1.1.312 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIF-R_Ig-like 0.51 40.0 3.56e-01 98.8% 56.8%
3283087 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.51 42.0 2.49e-01 96.2% 24.5%
3226495 11.1.5.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › STAT_bind 0.51 43.0 3.49e-01 98.8% 82.4%
5040230 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.50 37.0 4.05e-01 93.8% 100.0%