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As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00018

Bact-Vir

As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00018

Identity

Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-78
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hpmD00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.64 36.0 3.35e-01 72.7% 43.9%
6teyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.61e-01 75.8% 68.5%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.04e-01 72.7% 45.3%
1q1hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.45e-01 77.3% 65.9%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.48e-01 72.7% 73.9%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.18e-01 72.7% 52.0%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942265 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 44.0 4.15e-01 84.8% 83.5%
5070584 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 40.0 3.68e-01 72.7% 54.4%
3578228 103.1.1.26 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › MELK_UBA 0.56 45.0 4.26e-01 87.9% 86.3%
5012277 101.1.2.904 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_38 0.53 37.0 3.63e-01 77.3% 74.7%
4125761 219.1.1.17 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1_2 0.53 38.0 2.55e-01 77.3% 70.2%
2511580 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 36.0 3.03e-01 77.3% 39.2%
3282985 101.1.2.508 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25872 0.52 38.0 3.55e-01 83.3% 62.4%
3596115 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 3.62e-01 95.5% 68.8%
5040284 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 34.0 3.13e-01 71.2% 47.4%
4965712 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.52 36.0 3.28e-01 74.2% 56.8%
5035263 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.51 35.0 3.11e-01 72.7% 46.7%
4979355 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.17e-01 77.3% 62.7%
4940512 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 35.0 2.86e-01 72.7% 37.9%
5061097 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.51 36.0 3.42e-01 78.8% 67.1%
4032391 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.50 34.0 3.24e-01 72.7% 63.5%
3588536 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.50 36.0 3.42e-01 77.3% 73.8%
4947317 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.50 40.0 2.87e-01 95.5% 88.2%
5065664 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.50 34.0 2.91e-01 72.7% 39.5%