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As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00234
Bact-VirAs_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00234
Identity
- Kingdom:
- phage
Quality
68.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 240-366
Domain cluster:
rep: NC_028697.1__YP_009191553.1__AU092_gp46__00046__D5-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00877.26 best | NLPC_P60 | 44.8 | 1.40e-11 | 84.2% | 91.4% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.80 | 73.0 | 7.46e-01 | 96.1% | 100.0% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.80 | 75.0 | 7.11e-01 | 100.0% | 90.5% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.80 | 73.0 | 7.42e-01 | 98.4% | 97.6% |
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 74.0 | 7.25e-01 | 100.0% | 95.6% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.74 | 69.0 | 6.77e-01 | 100.0% | 94.0% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.71 | 65.0 | 5.97e-01 | 96.9% | 88.0% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.71 | 61.0 | 6.24e-01 | 94.5% | 93.5% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 21.0 | 3.02e-01 | 82.7% | 75.4% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.54 | 40.0 | 3.91e-01 | 100.0% | 71.7% |
| 3zleA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.53 | 18.0 | 3.01e-01 | 74.8% | 94.9% |
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 3.13e-01 | 86.6% | 93.0% |
| 2fp8B00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 40.0 | 3.11e-01 | 85.0% | 94.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287024 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 73.0 | 7.24e-01 | 97.6% | 86.9% |
| 3268199 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.85 | 80.0 | 7.69e-01 | 99.2% | 96.4% |
| 3076246 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.83 | 71.0 | 7.46e-01 | 97.6% | 98.3% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 75.0 | 7.55e-01 | 100.0% | 96.8% |
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 72.0 | 7.45e-01 | 96.1% | 98.3% |
| 182479 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.81 | 77.0 | 6.36e-01 | 100.0% | 63.5% |
| 4169712 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.81 | 75.0 | 7.58e-01 | 99.2% | 99.2% |
| 3278116 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 69.0 | 7.28e-01 | 94.5% | 99.1% |
| 3971907 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 75.0 | 7.35e-01 | 98.4% | 93.3% |
| 3286961 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 76.0 | 7.26e-01 | 100.0% | 97.2% |
| 161350 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 76.0 | 7.13e-01 | 100.0% | 89.9% |
| 4476649 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 76.0 | 7.46e-01 | 100.0% | 94.8% |
| 3963980 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.80 | 75.0 | 7.22e-01 | 100.0% | 97.9% |
| 4078132 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.79 | 74.0 | 7.38e-01 | 99.2% | 96.9% |
| 2410168 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.79 | 74.0 | 7.34e-01 | 99.2% | 95.5% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.79 | 74.0 | 7.06e-01 | 100.0% | 90.3% |
| 3284393 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.77 | 73.0 | 7.29e-01 | 100.0% | 97.7% |
| 3257922 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.76 | 55.0 | 6.34e-01 | 78.7% | 100.0% |
| 154189 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.76 | 69.0 | 6.98e-01 | 96.9% | 97.6% |
| 1064055 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.72 | 65.0 | 6.06e-01 | 96.9% | 90.8% |
| 1489617 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.71 | 61.0 | 6.10e-01 | 94.5% | 88.5% |
| 3282002 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 65.0 | 5.18e-01 | 98.4% | 68.9% |
| 3176702 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.62 | 56.0 | 5.25e-01 | 100.0% | 98.7% |
| 3648332 | 148.1.3.284 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF4371 | 0.50 | 34.0 | 3.33e-01 | 90.6% | 63.7% |
D2
medium
residues 108-174
Domain cluster:
rep: SRR1747065_scaffold_5_prodigal-single.1__X__X__00079__D136-185