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As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00245
Bact-VirAs_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00245
Identity
- Kingdom:
- phage
Quality
58.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 91-198
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 49.0 | 4.94e-01 | 100.0% | 84.9% |
| 4xotA03 | 2.40.30.250 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 44.0 | 4.81e-01 | 96.3% | 93.0% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.60 | 37.0 | 4.51e-01 | 100.0% | 98.5% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.60 | 43.0 | 4.78e-01 | 96.3% | 100.0% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.59 | 48.0 | 4.89e-01 | 96.3% | 91.3% |
| 4nzfD02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 36.0 | 3.85e-01 | 94.4% | 75.6% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.56 | 43.0 | 4.64e-01 | 94.4% | 100.0% |
| 1uasA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 35.0 | 3.79e-01 | 92.6% | 76.1% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.55 | 42.0 | 4.45e-01 | 93.5% | 93.5% |
| 2ed6A01 | 2.60.40.2770 | Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like | 0.55 | 48.0 | 4.28e-01 | 96.3% | 98.1% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.54 | 48.0 | 4.33e-01 | 100.0% | 90.6% |
| 8dkcB01 | 2.170.120.12 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › DNA-directed RNA polymerase, insert domain | 0.53 | 29.0 | 2.79e-01 | 95.4% | 43.9% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.51 | 31.0 | 3.72e-01 | 96.3% | 100.0% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 44.0 | 3.93e-01 | 100.0% | 88.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965956 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.64 | 50.0 | 5.41e-01 | 92.6% | 98.9% |
| 4995686 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.64 | 52.0 | 5.51e-01 | 97.2% | 98.9% |
| 5015718 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 45.0 | 5.05e-01 | 98.1% | 98.8% |
| 3942243 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 57.0 | 5.21e-01 | 100.0% | 96.4% |
| 3956941 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.57 | 39.0 | 4.05e-01 | 100.0% | 76.0% |
| 4071868 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.57 | 44.0 | 4.73e-01 | 95.4% | 100.0% |
| 5025895 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 48.0 | 4.86e-01 | 93.5% | 99.0% |
| 4826425 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 31.0 | 3.62e-01 | 100.0% | 87.1% |
| 3754551 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 44.0 | 4.35e-01 | 93.5% | 100.0% |
| 4606765 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.52 | 45.0 | 4.48e-01 | 100.0% | 95.5% |
| 4441621 | 3943.1.1.3 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › flgK_1st_1 | 0.50 | 31.0 | 3.35e-01 | 90.7% | 72.2% |
D2
high
residues 289-381