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B385R
Euk-VirAfrican_swine_fever_virus
B385R__YP_009703137__African_swine_fever_virus__10497
Identity
- Accession:
- YP_009703137 ↗
- Protein ID:
- B385R
- Kingdom:
- euk
Quality
63.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Asfuvirales›
Asfarviridae›
Asfivirus›
African_swine_fever_virus
TaxID: 10497
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-176
D2
medium
residues 202-280
Domain cluster:
rep: late_transcription_factor_VLTF3__YP_008052476__Phaeocystis_globosa_virus__251749__D211-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 60.7 | 2.00e-16 | 100.0% | 42.9% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cqnA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.68 | 48.0 | 4.90e-01 | 73.4% | 75.3% |
| 1wh4A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.67 | 49.0 | 4.59e-01 | 75.9% | 93.6% |
| 3al0B03 | 1.10.10.410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 45.0 | 4.95e-01 | 70.9% | 95.2% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.62 | 43.0 | 4.45e-01 | 73.4% | 84.0% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.62 | 45.0 | 4.43e-01 | 79.7% | 71.3% |
| 2e71A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.60 | 44.0 | 4.42e-01 | 84.8% | 75.9% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.58 | 40.0 | 3.94e-01 | 92.4% | 66.3% |
| 2doeA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.56 | 41.0 | 4.09e-01 | 79.7% | 77.1% |
| 2o2kA02 | 1.10.288.10 | Mainly Alpha › Orthogonal Bundle › Cobalamin-dependent Methionine Synthase; domain 2 › Cobalamin-dependent Methionine Synthase, domain 2 | 0.55 | 43.0 | 4.17e-01 | 83.5% | 79.8% |
| 4ex8A00 | 3.40.1790.10 | Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain | 0.55 | 43.0 | 3.00e-01 | 88.6% | 78.1% |
| 2oktA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 40.0 | 3.43e-01 | 79.7% | 50.0% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 36.0 | 4.00e-01 | 88.6% | 93.4% |
| 6ygiB01 | 1.10.4090.10 | Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus | 0.51 | 42.0 | 3.50e-01 | 92.4% | 69.2% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.54e-01 | 73.4% | 70.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3529864 | 101.1.2.118 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dcc1 | 0.68 | 47.0 | 5.12e-01 | 72.2% | 96.9% |
| 3416051 | 101.21.1.2 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › Nucleolin_bd | 0.67 | 47.0 | 5.04e-01 | 75.9% | 89.2% |
| 4008378 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.67 | 43.0 | 4.87e-01 | 73.4% | 94.5% |
| 3787690 | 101.1.1.49 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Rap1-DNA-bind | 0.64 | 46.0 | 4.53e-01 | 96.2% | 70.6% |
| 3476412 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.64 | 42.0 | 4.53e-01 | 82.3% | 83.1% |
| 3986645 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 44.0 | 4.73e-01 | 79.7% | 90.8% |
| 4624393 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.59 | 43.0 | 4.12e-01 | 77.2% | 93.3% |
| 3834548 | 101.1.3.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 | 0.56 | 35.0 | 3.72e-01 | 75.9% | 73.8% |
| 4024628 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 33.0 | 3.48e-01 | 87.3% | 68.6% |
D3
medium
residues 289-366
Domain cluster:
rep: hypothetical_protein_BNJ_00181__YP_009352592__Kaumoebavirus_Viruses.__X__D262-344
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04947.20 best | Pox_VLTF3 | 58.7 | 8.30e-16 | 100.0% | 41.7% |