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BBRF1
Euk-VirLymphocryptovirus_Macaca_pfe-lcl-E3
BBRF1__YP_010084673__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044
Identity
- Accession:
- YP_010084673 ↗
- Protein ID:
- BBRF1
- Kingdom:
- euk
Quality
73.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Lymphocryptovirus›
macacine_gammaherpesvirus_10
TaxID: 1716044
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-60_135-157_205-283_479-540
Domain cluster:
rep: U76__NP_042969__Human_betaherpesvirus_6A__32603__D57-282_547-593
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 94.3 | 9.30e-27 | 40.2% | 14.4% |
| PF01763.23 | Herpes_UL6 | 81.0 | 9.60e-23 | 30.1% | 11.2% |
| PF01763.23 | Herpes_UL6 | 37.5 | 1.40e-09 | 16.8% | 5.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mw6B00 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.59 | 18.0 | 2.64e-01 | 72.2% | 56.4% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 29.0 | 3.72e-01 | 90.4% | 85.6% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.52 | 15.0 | 2.82e-01 | 92.3% | 97.8% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 20.0 | 2.82e-01 | 87.6% | 71.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230791 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 22.0 | 3.16e-01 | 95.7% | 78.0% |
| 3637371 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.50 | 21.0 | 2.86e-01 | 85.6% | 72.4% |
| 4641033 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 21.0 | 3.02e-01 | 89.0% | 83.3% |
D2
medium
residues 61-134_158-204_541-576
Domain cluster:
rep: capsid_portal_protein__YP_081550__Human_betaherpesvirus_5__10359__D90-194_601-636
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01763.23 best | Herpes_UL6 | 62.8 | 3.10e-17 | 52.2% | 13.7% |