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BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00089

Bact-Vir

BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00089

Identity

Kingdom:
phage

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-88
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vz0A01 3.90.1530.30 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › 0.72 43.0 4.89e-01 100.0% 82.5%
1efdN02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 32.0 2.62e-01 98.9% 29.2%
3p12A01 3.40.1650.10 Alpha Beta › 3-Layer(aba) Sandwich › RbsD-like fold › RbsD-like domain 0.53 30.0 2.72e-01 100.0% 37.1%
3eixA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 31.0 2.54e-01 100.0% 29.1%
4j9jA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 37.0 2.73e-01 100.0% 29.5%
3gzbA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.14e-01 78.4% 49.4%
3wxmB03 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.50 30.0 2.91e-01 98.9% 48.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073795 876.1.1.0 a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.71 48.0 4.25e-01 100.0% 48.8%
4955938 2007.1.2.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp 0.56 35.0 3.08e-01 100.0% 40.0%
5033429 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.54 36.0 2.98e-01 100.0% 35.8%
4950641 2484.1.1.23 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydantoinase_A 0.54 38.0 2.98e-01 76.1% 72.4%
2051566 2007.1.14.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.54 33.0 2.85e-01 100.0% 38.3%
4032523 2007.1.14.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.53 33.0 2.94e-01 100.0% 38.6%
2050432 2007.1.14.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.52 33.0 2.87e-01 98.9% 38.5%
1298571 3207.1.1.1 alpha bundles › PmoA › PmoA › PmoA › AMO 0.52 44.0 3.33e-01 100.0% 81.1%
4987550 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 31.0 2.97e-01 100.0% 47.3%
5035493 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.51 36.0 3.44e-01 80.7% 62.9%
3888067 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.51 30.0 2.72e-01 100.0% 40.8%
3960538 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.51 31.0 2.69e-01 100.0% 36.6%