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BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00273
Bact-VirBC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00273
Identity
- Kingdom:
- phage
Quality
66.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 315-463
Domain cluster:
rep: LR990834.1__CAD7757509.1__ATHO_20__00020__D167-317
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01551.30 best | Peptidase_M23 | 95.1 | 3.20e-27 | 71.1% | 92.7% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hsiB02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.94 | 76.0 | 7.68e-01 | 100.0% | 83.6% |
| 4bh5A00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.90 | 76.0 | 8.22e-01 | 97.3% | 100.0% |
| 1qwyA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.90 | 77.0 | 7.29e-01 | 96.0% | 76.7% |
| 2gu1A03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.89 | 76.0 | 8.10e-01 | 94.6% | 99.2% |
| 7qrlA01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.88 | 75.0 | 7.89e-01 | 93.3% | 95.6% |
| 4rnyA03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.88 | 73.0 | 7.92e-01 | 95.3% | 99.2% |
| 6jn7A01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.86 | 75.0 | 7.00e-01 | 98.7% | 76.6% |
| 3csqA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.76 | 71.0 | 6.88e-01 | 98.7% | 95.7% |
| 5b0hA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.75 | 64.0 | 6.78e-01 | 92.6% | 100.0% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.65 | 28.0 | 4.12e-01 | 90.6% | 93.7% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.64 | 35.0 | 4.39e-01 | 85.2% | 89.7% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.62 | 32.0 | 3.38e-01 | 79.2% | 53.6% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.60 | 34.0 | 4.36e-01 | 94.6% | 96.4% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.56 | 48.0 | 3.99e-01 | 89.9% | 74.4% |
| 5lohB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 25.0 | 3.36e-01 | 85.2% | 79.7% |
| 3zduA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 27.0 | 3.44e-01 | 86.6% | 84.2% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.52 | 33.0 | 3.93e-01 | 92.6% | 95.9% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.51 | 36.0 | 4.00e-01 | 77.2% | 93.9% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4379172 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.94 | 76.0 | 8.08e-01 | 97.3% | 92.5% |
| 3590598 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.94 | 82.0 | 8.70e-01 | 98.7% | 100.0% |
| 3965283 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.92 | 74.0 | 8.18e-01 | 94.6% | 100.0% |
| 3290826 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 77.0 | 7.44e-01 | 96.6% | 78.7% |
| 3966112 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 79.0 | 7.41e-01 | 100.0% | 76.0% |
| 4471307 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 77.0 | 7.84e-01 | 95.3% | 89.6% |
| 3984086 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.90 | 77.0 | 6.87e-01 | 96.0% | 66.7% |
| 3056400 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.90 | 77.0 | 8.24e-01 | 97.3% | 100.0% |
| 4371098 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 70.0 | 7.87e-01 | 92.6% | 100.0% |
| 3974471 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.89 | 78.0 | 8.26e-01 | 98.7% | 99.3% |
| 2774289 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 77.0 | 7.43e-01 | 95.3% | 81.0% |
| 3279250 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 79.0 | 8.16e-01 | 96.0% | 97.1% |
| 2663449 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 74.0 | 7.89e-01 | 91.9% | 97.7% |
| 3386468 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 77.0 | 7.36e-01 | 94.0% | 80.0% |
| None | — | 0.89 | 77.0 | 8.08e-01 | 95.3% | 97.8% | |
| 1513000 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.88 | 73.0 | 6.88e-01 | 97.3% | 72.8% |
| 5004816 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.87 | 80.0 | 7.53e-01 | 95.3% | 99.4% |
| 4999158 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.87 | 81.0 | 6.85e-01 | 98.0% | 97.8% |
| 1891424 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.86 | 69.0 | 7.63e-01 | 87.9% | 100.0% |
| 3279203 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.86 | 72.0 | 7.45e-01 | 91.9% | 92.1% |
| 4416013 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.86 | 79.0 | 7.69e-01 | 97.3% | 88.7% |
| 4034361 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.85 | 72.0 | 7.62e-01 | 94.6% | 96.3% |
| 3961687 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.84 | 78.0 | 6.84e-01 | 96.6% | 96.7% |
| 3968533 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.84 | 77.0 | 7.69e-01 | 94.6% | 93.3% |
| 3385726 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.84 | 76.0 | 6.51e-01 | 98.7% | 63.6% |
| 3387971 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.84 | 79.0 | 7.41e-01 | 98.7% | 82.9% |
| 3966987 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.84 | 79.0 | 7.64e-01 | 98.0% | 93.9% |
| 4978013 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.83 | 79.0 | 6.95e-01 | 99.3% | 97.1% |
| 4032028 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.83 | 79.0 | 7.30e-01 | 98.7% | 95.6% |
| 5073481 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.83 | 79.0 | 6.78e-01 | 99.3% | 97.3% |
| 4931567 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.83 | 79.0 | 7.18e-01 | 99.3% | 93.7% |
| 2774531 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.82 | 74.0 | 7.04e-01 | 94.0% | 95.9% |
| 3957060 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.82 | 72.0 | 7.36e-01 | 97.3% | 93.8% |
| 3589154 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.81 | 75.0 | 7.44e-01 | 96.6% | 99.4% |
| 4941596 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.81 | 75.0 | 7.04e-01 | 96.6% | 96.0% |
| 2573963 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.80 | 75.0 | 6.84e-01 | 97.3% | 77.4% |
| 4977450 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.79 | 72.0 | 6.80e-01 | 96.0% | 98.3% |
| 4948114 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.78 | 74.0 | 7.16e-01 | 100.0% | 97.0% |
| 5073999 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.78 | 74.0 | 6.98e-01 | 100.0% | 91.4% |
| 5045468 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.78 | 74.0 | 7.02e-01 | 99.3% | 98.2% |
| 3252186 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.77 | 69.0 | 7.10e-01 | 94.0% | 100.0% |
| 5045078 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.77 | 73.0 | 6.83e-01 | 100.0% | 95.6% |
| 1907311 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.77 | 69.0 | 6.98e-01 | 93.3% | 97.3% |
| 5079376 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.76 | 73.0 | 6.79e-01 | 100.0% | 92.1% |
| 3578525 | 325.1.6.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26730 | 0.76 | 69.0 | 6.74e-01 | 95.3% | 93.1% |
| 1877223 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.75 | 65.0 | 6.84e-01 | 92.6% | 100.0% |
| 3895927 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.74 | 64.0 | 6.77e-01 | 94.0% | 100.0% |
| 3888342 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.74 | 62.0 | 6.69e-01 | 90.6% | 100.0% |
| 3928836 | 325.1.6.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26730 | 0.73 | 66.0 | 6.42e-01 | 95.3% | 97.5% |
| 5072111 | 325.1.6.9 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26482 | 0.72 | 65.0 | 6.49e-01 | 97.3% | 95.5% |
| 4962739 | 325.1.6.9 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26482 | 0.71 | 64.0 | 6.23e-01 | 96.0% | 98.1% |
| 5081813 | 325.1.7.38 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PS_Dcarbxylase | 0.65 | 59.0 | 5.98e-01 | 96.0% | 95.3% |
| 4626250 | 325.1.6.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase | 0.65 | 59.0 | 5.73e-01 | 98.7% | 87.1% |
| 1296266 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.56 | 48.0 | 3.99e-01 | 89.9% | 74.6% |
| 5041579 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 36.0 | 4.13e-01 | 82.6% | 92.4% |
| 3575679 | 12.3.1.42 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 | 0.55 | 45.0 | 4.09e-01 | 86.6% | 87.2% |
D2
medium
residues 1-63