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BFRF1
Euk-VirVombatid_gammaherpesvirus_1
BFRF1__YP_010087436__Vombatid_gammaherpesvirus_1__2052651
Identity
- Accession:
- YP_010087436 ↗
- Protein ID:
- BFRF1
- Kingdom:
- euk
Quality
67.1
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Manticavirus›
Vombatid_gammaherpesvirus_1
TaxID: 2052651
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-174
Domain cluster:
rep: nuclear_egress_membrane_protein__NP_944407__Psittacid_alphaherpesvirus_1__50294__D2-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04541.20 best | Herpes_U34 | 157.5 | 3.10e-46 | 98.8% | 90.3% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.73 | 18.0 | 3.85e-01 | 71.0% | 97.3% |
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.71 | 18.0 | 3.75e-01 | 72.2% | 94.7% |
| 1m55A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.64 | 37.0 | 3.57e-01 | 70.4% | 49.2% |
| 1odhA01 | 2.20.25.670 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain | 0.64 | 20.0 | 3.06e-01 | 91.1% | 63.4% |
| 6usmB01 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.59 | 34.0 | 3.67e-01 | 92.9% | 64.6% |
| 1ks6A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 31.0 | 3.72e-01 | 91.7% | 92.5% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.50 | 30.0 | 3.70e-01 | 74.6% | 95.2% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.50 | 46.0 | 3.80e-01 | 99.4% | 81.0% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.50 | 28.0 | 3.09e-01 | 94.1% | 66.9% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 29.0 | 3.04e-01 | 74.0% | 60.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4802990 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.96 | 90.0 | 8.69e-01 | 100.0% | 88.0% |
| 4802986 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.89 | 77.0 | 7.53e-01 | 100.0% | 84.0% |
| 2813818 | 3984.1.1.1 ↗ | beta sandwiches › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpesvirus nuclear egress complex subunit M50 N-terminal domain › Herpes_U34 | 0.81 | 74.0 | 7.28e-01 | 100.0% | 91.1% |
| 4951451 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 33.0 | 3.56e-01 | 74.0% | 62.1% |
| 4970858 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.56 | 29.0 | 3.50e-01 | 98.2% | 73.6% |
| 4107956 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 31.0 | 3.56e-01 | 91.7% | 74.2% |
| 3406485 | 1181.1.1.0 ↗ | 0.53 | 17.0 | 2.72e-01 | 71.0% | 71.4% | |
| 3959925 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 28.0 | 3.51e-01 | 70.4% | 87.0% |
| 4201251 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.52 | 36.0 | 3.06e-01 | 71.0% | 45.8% |
| 4929322 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 26.0 | 3.29e-01 | 94.7% | 80.0% |
| 5025689 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 32.0 | 3.65e-01 | 95.3% | 84.0% |
| 3087264 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.50 | 26.0 | 3.21e-01 | 97.0% | 78.1% |
| 2718202 | 288.1.1.3 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1 | 0.50 | 45.0 | 3.79e-01 | 98.8% | 81.2% |