BGLF5

Euk-Vir

Lymphocryptovirus_Macaca_pfe-lcl-E3

BGLF5__YP_010084678__Lymphocryptovirus_Macaca_pfe-lcl-E3__1716044

Identity

83.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Lymphocryptovirus› macacine_gammaherpesvirus_10

TaxID: 1716044

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-128

PDB

Domain cluster: rep: deoxyribonuclease__YP_009551847__Rhinolophus_gammaherpesvirus_1__2054179__D9-136

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	110.9	9.00e-32	100.0%	24.5%

D2 medium residues 155-182_228-354_392-433

PDB

Domain cluster: rep: deoxyribonuclease__YP_443858__Papiine_alphaherpesvirus_2__340907__D355-603

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	191.2	4.20e-56	66.5%	28.4%
PF01771.24	Viral_alk_exo	39.2	5.30e-10	21.8%	9.1%
PF01771.24	Viral_alk_exo	28.8	7.20e-07	15.2%	6.5%

D3 medium residues 183-227_355-391

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	42.5	5.30e-11	54.9%	8.9%
PF01771.24	Viral_alk_exo	34.9	1.00e-08	52.4%	7.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3odhA00	3.40.91.20	Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease ›	0.51	44.0	3.45e-01	100.0%	75.8%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3262255	2008.1.1.50 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ	0.57	53.0	4.06e-01	100.0%	53.7%
5075795	12.1.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain	0.50	28.0	3.30e-01	90.2%	80.0%