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BK013345.1__DAD54626.1__X__00043
Bact-VirBK013345.1__DAD54626.1__X__00043
Identity
- Accession:
- BK013345 ↗
- Kingdom:
- phage
Quality
64.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 453-556
D2
medium
residues 152-258
Domain cluster:
rep: KF356198.1__AGR48562.1__A4L_35__00035__D190-341
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jmdA00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.56 | 47.0 | 3.52e-01 | 90.7% | 54.1% |
| 4zboC00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.56 | 46.0 | 3.52e-01 | 90.7% | 55.6% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.55 | 35.0 | 3.34e-01 | 88.8% | 55.3% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 42.0 | 3.89e-01 | 86.9% | 80.1% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 44.0 | 4.27e-01 | 93.5% | 91.7% |
| 4rljB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 41.0 | 3.72e-01 | 87.9% | 89.1% |
| 4ae8D00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 44.0 | 3.82e-01 | 95.3% | 78.8% |
| 2dslA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 44.0 | 4.32e-01 | 94.4% | 95.7% |
| 2fs2B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 46.0 | 4.20e-01 | 99.1% | 92.8% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 44.0 | 4.01e-01 | 95.3% | 79.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398140 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.61 | 38.0 | 4.48e-01 | 88.8% | 90.7% |
| 3880624 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 33.0 | 3.73e-01 | 95.3% | 78.8% |
| 4466408 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.54 | 47.0 | 4.13e-01 | 92.5% | 88.7% |
| 3188706 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.53 | 47.0 | 4.03e-01 | 96.3% | 88.5% |
| 3962944 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 45.0 | 4.04e-01 | 94.4% | 91.3% |
| 4499680 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.52 | 46.0 | 3.92e-01 | 94.4% | 86.7% |
| 4962347 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.51 | 45.0 | 4.25e-01 | 95.3% | 90.8% |
| 3468401 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 40.0 | 4.31e-01 | 92.5% | 96.7% |
| 4133217 | 10.1.1.55 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PL28 | 0.51 | 45.0 | 3.43e-01 | 100.0% | 86.4% |
| 2420857 | 10.1.1.55 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PL28 | 0.51 | 45.0 | 3.44e-01 | 100.0% | 88.1% |
| 3802038 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.51 | 38.0 | 3.28e-01 | 78.5% | 71.8% |
| 3287058 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.51 | 44.0 | 3.81e-01 | 94.4% | 84.8% |
| 3642155 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.50 | 38.0 | 3.30e-01 | 80.4% | 60.6% |
| 4261656 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.50 | 45.0 | 3.62e-01 | 96.3% | 75.5% |
| 4973515 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.50 | 46.0 | 4.19e-01 | 100.0% | 88.6% |
| 4079500 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.50 | 44.0 | 3.57e-01 | 95.3% | 70.5% |
| 4303631 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.50 | 46.0 | 4.05e-01 | 99.1% | 82.7% |
| 4088498 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.50 | 44.0 | 3.78e-01 | 94.4% | 76.4% |
D3
medium
residues 400-452
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2avuB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.74 | 62.0 | 5.04e-01 | 96.2% | 58.7% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 41.0 | 4.67e-01 | 90.6% | 94.6% |
| 3q1pA01 | 6.10.250.1120 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 43.0 | 4.78e-01 | 84.9% | 100.0% |
| 4djgB00 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.60 | 46.0 | 4.89e-01 | 90.6% | 93.6% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 41.0 | 3.47e-01 | 94.3% | 45.7% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 41.0 | 3.53e-01 | 92.5% | 48.3% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 40.0 | 3.21e-01 | 88.7% | 35.0% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.55 | 42.0 | 4.26e-01 | 84.9% | 94.3% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.55 | 43.0 | 3.65e-01 | 98.1% | 86.2% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.54 | 48.0 | 3.20e-01 | 100.0% | 25.5% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 42.0 | 3.65e-01 | 92.5% | 54.7% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 42.0 | 4.10e-01 | 90.6% | 83.1% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 39.0 | 3.77e-01 | 88.7% | 89.6% |
| 1x40A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.51 | 36.0 | 3.21e-01 | 83.0% | 74.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3417201 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.64 | 53.0 | 3.85e-01 | 100.0% | 78.3% |
| 3963355 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.58 | 45.0 | 4.00e-01 | 94.3% | 60.0% |
| 3977054 | 4274.1.1.1 ↗ | extended segments › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › MalF_N_TM | 0.56 | 45.0 | 4.45e-01 | 90.6% | 85.5% |
| 4942636 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.53 | 38.0 | 4.12e-01 | 96.2% | 91.1% |
| 3990688 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 44.0 | 3.69e-01 | 100.0% | 75.8% |
| 4945676 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.50 | 36.0 | 3.17e-01 | 86.8% | 47.8% |