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BK013346.1__DAD54672.1__X__00009
Bact-VirBK013346.1__DAD54672.1__X__00009
Identity
- Accession:
- BK013346 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-45_57-106
Domain cluster:
rep: NC_028883.1__YP_009206170.1__PHIMMP01_20051__00052__D2-102
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.85 | 74.0 | 7.28e-01 | 100.0% | 86.5% |
| 4lrvF00 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.76 | 67.0 | 6.41e-01 | 97.8% | 99.0% |
| 7x4eA01 | 1.10.1220.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE | 0.75 | 66.0 | 6.29e-01 | 97.8% | 96.3% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.71 | 63.0 | 6.41e-01 | 97.8% | 100.0% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 37.0 | 4.73e-01 | 93.3% | 97.8% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 34.0 | 4.24e-01 | 88.9% | 83.6% |
| 6n8eA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.62 | 56.0 | 3.96e-01 | 97.8% | 77.7% |
| 2kebA00 | 1.10.8.530 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain | 0.62 | 39.0 | 4.11e-01 | 98.9% | 71.8% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 30.0 | 2.87e-01 | 83.3% | 38.5% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 36.0 | 4.27e-01 | 94.4% | 89.7% |
| 2jgpA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.61 | 54.0 | 4.00e-01 | 97.8% | 77.7% |
| 2vsqA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.61 | 55.0 | 4.00e-01 | 98.9% | 74.5% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 34.0 | 3.48e-01 | 88.9% | 58.0% |
| 7emyA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.60 | 53.0 | 3.72e-01 | 96.7% | 74.2% |
| 7jtjA01 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.57 | 50.0 | 3.69e-01 | 98.9% | 83.0% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 38.0 | 3.12e-01 | 100.0% | 35.0% |
| 7yulA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.54 | 32.0 | 3.27e-01 | 94.4% | 60.0% |
| 4bjqA00 | 1.10.150.770 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 33.0 | 3.59e-01 | 93.3% | 75.6% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 36.0 | 3.25e-01 | 73.3% | 60.3% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.51 | 40.0 | 3.14e-01 | 83.3% | 54.9% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.79e-01 | 75.6% | 88.2% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.51 | 38.0 | 3.86e-01 | 81.1% | 90.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4373529 | 101.1.11.43 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY | 0.88 | 83.0 | 7.96e-01 | 100.0% | 98.0% |
| 5011682 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 59.0 | 6.68e-01 | 95.6% | 100.0% |
| 2874478 | 101.1.11.12 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DndE | 0.75 | 67.0 | 6.21e-01 | 100.0% | 92.1% |
| 154009 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.74 | 67.0 | 6.50e-01 | 97.8% | 100.0% |
| 1102657 | 101.1.11.12 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DndE | 0.72 | 65.0 | 6.15e-01 | 100.0% | 98.1% |
| 5035425 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.61 | 46.0 | 4.38e-01 | 78.9% | 97.1% |
| 4142114 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.60 | 54.0 | 3.82e-01 | 97.8% | 77.4% |
| 3951073 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.60 | 53.0 | 3.80e-01 | 97.8% | 76.9% |
| 4985682 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.59 | 35.0 | 3.08e-01 | 85.6% | 39.3% |
| 3786179 | 323.1.1.14 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AATase | 0.58 | 51.0 | 3.59e-01 | 96.7% | 84.3% |
| 140810 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.54 | 38.0 | 3.14e-01 | 100.0% | 38.0% |
| 3363694 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.53 | 36.0 | 2.92e-01 | 70.0% | 36.0% |
| None | — | 0.53 | 38.0 | 3.60e-01 | 75.6% | 67.3% | |
| 3937183 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 39.0 | 3.33e-01 | 77.8% | 48.3% |
| 4394843 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.52 | 43.0 | 3.36e-01 | 92.2% | 95.2% |
| 3536813 | 1008.1.1.30 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › EVC2_like | 0.52 | 37.0 | 2.26e-01 | 75.6% | 34.7% |
| 3284349 | 101.1.2.735 ↗ | alpha arrays › HTH › HTH › winged helix domain › PspC | 0.52 | 36.0 | 3.70e-01 | 71.1% | 90.6% |
| 4160448 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.52 | 44.0 | 2.84e-01 | 94.4% | 87.1% |
| 3677767 | 109.4.1.1991 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_CAF1_bind, HEAT_ULK4 | 0.52 | 38.0 | 2.57e-01 | 78.9% | 25.1% |
| 3475426 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.50 | 37.0 | 4.19e-01 | 85.6% | 100.0% |
| 5001289 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.50 | 36.0 | 3.42e-01 | 75.6% | 96.3% |