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BK013347.1__DAD54711.1__X__00029
Bact-VirBK013347.1__DAD54711.1__X__00029
Identity
- Accession:
- BK013347 ↗
- Kingdom:
- phage
Quality
52.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-122
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.66 | 53.0 | 3.58e-01 | 92.4% | 57.3% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.60 | 40.0 | 3.81e-01 | 100.0% | 57.6% |
| 4logB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.58 | 45.0 | 3.23e-01 | 82.3% | 79.7% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 48.0 | 4.37e-01 | 98.7% | 66.7% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.57 | 52.0 | 4.13e-01 | 100.0% | 86.9% |
| 4z1xA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 49.0 | 4.09e-01 | 100.0% | 69.9% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 49.0 | 4.16e-01 | 100.0% | 84.5% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 46.0 | 3.20e-01 | 98.7% | 92.8% |
| 4ttrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.34e-01 | 97.5% | 42.8% |
| 7oq4Z01 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.51 | 38.0 | 3.59e-01 | 81.0% | 80.6% |
| 1n5uA05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.50 | 45.0 | 4.00e-01 | 100.0% | 87.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953228 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.72 | 55.0 | 3.72e-01 | 100.0% | 23.3% |
| 5035157 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.70 | 51.0 | 3.45e-01 | 97.5% | 20.5% |
| 5016128 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.67 | 48.0 | 4.92e-01 | 98.7% | 80.0% |
| 3536460 | 109.3.1.139 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › RabGAP-TBC | 0.66 | 48.0 | 4.08e-01 | 97.5% | 46.9% |
| 3622777 | 605.4.1.7 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › NKAIN | 0.65 | 47.0 | 4.75e-01 | 100.0% | 76.2% |
| 3531278 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.64 | 47.0 | 3.84e-01 | 97.5% | 42.1% |
| 3949864 | 632.1.1.37 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF6474 | 0.64 | 51.0 | 4.95e-01 | 100.0% | 76.7% |
| 3274397 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.64 | 56.0 | 4.63e-01 | 97.5% | 78.6% |
| 3604922 | 1189.1.1.3 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › GARP | 0.64 | 46.0 | 3.42e-01 | 77.2% | 79.5% |
| 4605395 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.63 | 46.0 | 3.54e-01 | 81.0% | 33.0% |
| 4301843 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.62 | 46.0 | 3.59e-01 | 82.3% | 35.4% |
| 4953697 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.62 | 46.0 | 4.72e-01 | 100.0% | 84.0% |
| 3815966 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.62 | 55.0 | 4.47e-01 | 98.7% | 64.8% |
| 3370990 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.61 | 57.0 | 4.61e-01 | 100.0% | 57.9% |
| 3835699 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.60 | 53.0 | 4.27e-01 | 97.5% | 56.7% |
| 3613277 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.60 | 51.0 | 4.32e-01 | 93.7% | 79.2% |
| 3356723 | 611.7.1.15 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Rx_N | 0.59 | 52.0 | 4.54e-01 | 98.7% | 80.8% |
| 3972445 | 611.4.1.2 ↗ | alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like › Acyl-CoA_dh_C | 0.59 | 52.0 | 4.38e-01 | 98.7% | 73.3% |
| 4142332 | 4177.1.1.66 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › ATG17_like | 0.58 | 52.0 | 3.38e-01 | 100.0% | 67.7% |
| 3663448 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.58 | 46.0 | 4.68e-01 | 100.0% | 87.5% |
| 3303305 | 3562.1.1.11 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG | 0.57 | 52.0 | 4.04e-01 | 100.0% | 52.7% |
| 4544758 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.57 | 51.0 | 4.57e-01 | 98.7% | 80.0% |
| 3609889 | 633.15.1.0 ↗ | alpha bundles › Bromodomain-like › alpha-ketoacid dehydrogenase kinase-N › alpha-ketoacid dehydrogenase kinase-N | 0.57 | 50.0 | 4.01e-01 | 100.0% | 48.8% |
| 4623710 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.54 | 47.0 | 3.45e-01 | 97.5% | 51.2% |
| 4877165 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 45.0 | 3.55e-01 | 100.0% | 52.0% |
| 4133406 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.51 | 44.0 | 3.32e-01 | 97.5% | 42.9% |
D2
medium
residues 123-181_204-218_294-318
D3
medium
residues 523-578