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BK059895.1__DAZ90882.1__Cy-LDV1_g08__00008
Bact-VirBK059895.1__DAZ90882.1__Cy-LDV1_g08__00008
Identity
- Accession:
- BK059895 ↗
- Kingdom:
- phage
Quality
78.4
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-107
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.79 | 46.0 | 5.91e-01 | 79.0% | 98.4% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 48.0 | 5.11e-01 | 86.7% | 77.4% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 48.0 | 4.57e-01 | 82.9% | 60.8% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.68 | 50.0 | 5.24e-01 | 77.1% | 100.0% |
| 1z85A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.67 | 40.0 | 4.79e-01 | 73.3% | 92.5% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.66 | 55.0 | 5.31e-01 | 86.7% | 94.8% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.65 | 46.0 | 5.22e-01 | 79.0% | 100.0% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 47.0 | 3.84e-01 | 84.8% | 69.6% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 43.0 | 4.59e-01 | 84.8% | 85.9% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.59 | 44.0 | 3.77e-01 | 79.0% | 51.2% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 41.0 | 3.95e-01 | 75.2% | 72.1% |
| 2rc5B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 40.0 | 3.72e-01 | 74.3% | 85.0% |
| 1wqsA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 43.0 | 4.39e-01 | 81.9% | 89.3% |
| 1havB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 42.0 | 4.30e-01 | 80.0% | 87.4% |
| 3oo2A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 40.0 | 3.56e-01 | 88.6% | 56.7% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.56e-01 | 85.7% | 74.7% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.65e-01 | 77.1% | 70.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.74 | 66.0 | 6.76e-01 | 100.0% | 99.0% |
| 5082328 | 1.1.13.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join_3 | 0.74 | 57.0 | 5.96e-01 | 79.0% | 100.0% |
| 1291989 | 1.1.5.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ-like | 0.72 | 48.0 | 5.11e-01 | 86.7% | 77.4% |
| 3943844 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.71 | 49.0 | 5.07e-01 | 81.9% | 75.0% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.71 | 55.0 | 5.91e-01 | 81.0% | 100.0% |
| 4395103 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 42.0 | 4.49e-01 | 71.4% | 68.9% |
| 5023947 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.68 | 45.0 | 3.81e-01 | 81.9% | 41.2% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.68 | 57.0 | 5.75e-01 | 89.5% | 99.0% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 50.0 | 5.54e-01 | 79.0% | 98.8% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.66 | 55.0 | 5.31e-01 | 86.7% | 94.8% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.62 | 55.0 | 5.40e-01 | 93.3% | 96.4% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.62 | 46.0 | 4.61e-01 | 77.1% | 100.0% |
| 5061894 | 1.1.12.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins | 0.59 | 43.0 | 4.42e-01 | 81.0% | 80.0% |
| 3502140 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 49.0 | 3.69e-01 | 89.5% | 97.2% |
| 5012251 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 48.0 | 4.08e-01 | 100.0% | 89.7% |
| 3515391 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 48.0 | 3.63e-01 | 99.0% | 94.8% |
| 3848539 | 58.1.1.1 ↗ | beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1 | 0.52 | 39.0 | 3.81e-01 | 79.0% | 84.3% |
| 3559952 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.52 | 45.0 | 3.47e-01 | 96.2% | 60.0% |