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BK059895.1__DAZ90908.1__Cy-LDV1_g34__00034
Bact-VirBK059895.1__DAZ90908.1__Cy-LDV1_g34__00034
Identity
- Accession:
- BK059895 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-34_61-207
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3x1lB03 | 2.60.40.4350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 44.0 | 5.48e-01 | 100.0% | 92.4% |
| 3kg4A00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 53.0 | 5.09e-01 | 100.0% | 70.7% |
| 5h9fJ00 | 3.30.70.2660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 56.0 | 5.04e-01 | 100.0% | 70.8% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.60 | 35.0 | 3.98e-01 | 86.0% | 76.5% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 34.0 | 3.81e-01 | 90.2% | 71.8% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 30.0 | 3.49e-01 | 100.0% | 73.4% |
| 3u83A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 28.0 | 3.36e-01 | 100.0% | 72.3% |
| 3c0wA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 27.0 | 3.05e-01 | 80.5% | 58.3% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.62e-01 | 100.0% | 79.3% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 35.0 | 3.85e-01 | 90.2% | 80.6% |
| 4hvzA02 | 3.30.70.2970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 | 0.52 | 33.0 | 3.88e-01 | 99.4% | 92.9% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 39.0 | 4.25e-01 | 90.2% | 94.8% |
| 2gx8A02 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 30.0 | 3.74e-01 | 98.2% | 94.9% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 31.0 | 3.73e-01 | 97.0% | 91.6% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.50 | 31.0 | 3.72e-01 | 100.0% | 96.1% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.50 | 30.0 | 3.64e-01 | 100.0% | 92.4% |
| 2gnnB00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.50 | 26.0 | 3.22e-01 | 72.0% | 81.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997963 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.82 | 48.0 | 5.89e-01 | 100.0% | 90.5% |
| 4947523 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.74 | 47.0 | 5.52e-01 | 100.0% | 90.4% |
| 5021424 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.72 | 58.0 | 5.13e-01 | 100.0% | 59.6% |
| 5022577 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.71 | 55.0 | 5.92e-01 | 100.0% | 93.6% |
| 5042927 | 304.51.1.22 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF29613 | 0.68 | 48.0 | 5.34e-01 | 100.0% | 91.5% |
| 4996027 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.67 | 63.0 | 5.33e-01 | 100.0% | 79.2% |
| 4939613 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.67 | 50.0 | 5.49e-01 | 99.4% | 96.9% |
| 5073756 | 304.139.1.3 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 | 0.67 | 62.0 | 4.88e-01 | 100.0% | 69.5% |
| 5013689 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.66 | 62.0 | 4.80e-01 | 100.0% | 69.1% |
| 4929402 | 304.139.1.3 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 | 0.66 | 62.0 | 4.94e-01 | 100.0% | 72.1% |
| 1144774 | 304.51.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › RAMPs | 0.66 | 58.0 | 5.45e-01 | 100.0% | 77.3% |
| 5012279 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.66 | 51.0 | 5.53e-01 | 98.8% | 97.8% |
| 4991257 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.65 | 60.0 | 4.86e-01 | 100.0% | 96.1% |
| 4628096 | 304.51.1.22 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF29613 | 0.65 | 46.0 | 5.13e-01 | 99.4% | 96.0% |
| 4997962 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.64 | 60.0 | 5.07e-01 | 100.0% | 82.3% |
| 4969506 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.64 | 50.0 | 5.27e-01 | 99.4% | 94.4% |
| 5083152 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.63 | 56.0 | 5.16e-01 | 100.0% | 74.8% |
| 4662659 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.62 | 57.0 | 5.10e-01 | 100.0% | 71.6% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.57 | 41.0 | 4.20e-01 | 86.6% | 78.1% |
| 5065326 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.57 | 26.0 | 3.30e-01 | 70.1% | 71.6% |
| 4991896 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.56 | 26.0 | 3.45e-01 | 70.1% | 79.5% |
| 1396465 | 12.1.1.43 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 | 0.56 | 33.0 | 3.82e-01 | 86.0% | 79.8% |
| 5016346 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.55 | 29.0 | 3.38e-01 | 70.7% | 68.3% |
| 3706613 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 34.0 | 3.39e-01 | 100.0% | 58.2% |
| 5037829 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.55 | 31.0 | 3.84e-01 | 98.2% | 89.0% |
| 3497298 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.54 | 42.0 | 4.52e-01 | 100.0% | 95.7% |
| 3979231 | 872.1.1.4 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › DUF4312 | 0.53 | 32.0 | 3.93e-01 | 76.2% | 98.9% |
| 3988248 | 12.1.1.43 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 | 0.53 | 31.0 | 3.55e-01 | 85.4% | 78.3% |
| 3993158 | 304.9.1.25 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_7 | 0.53 | 34.0 | 3.47e-01 | 100.0% | 65.6% |
| 3943661 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.53 | 32.0 | 3.97e-01 | 95.7% | 99.0% |
| 3290943 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 28.0 | 3.32e-01 | 98.2% | 78.1% |
| 5058189 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.51 | 32.0 | 3.79e-01 | 100.0% | 95.2% |
| 4101838 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.50 | 32.0 | 3.69e-01 | 98.8% | 91.8% |
| 4997598 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 31.0 | 3.66e-01 | 92.7% | 87.8% |