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BK061310.1__DAZ90155.1__PROPHIFVLQ01-1_68__00068
Bact-VirBK061310.1__DAZ90155.1__PROPHIFVLQ01-1_68__00068
Identity
- Accession:
- BK061310 ↗
- Kingdom:
- phage
Quality
55.1
mean pLDDT
Taxonomy
TaxID: 2962750
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 989-1156
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26571.1 best | VldE | 94.1 | 6.30e-27 | 63.1% | 99.1% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lbuA02 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.61 | 42.0 | 4.81e-01 | 71.4% | 91.5% |
| 1m93A00 | 1.10.287.580 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 19.0 | 3.22e-01 | 97.0% | 95.7% |
| 1jidA00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.55 | 27.0 | 3.23e-01 | 73.2% | 66.7% |
| 7pzoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 27.0 | 3.45e-01 | 71.4% | 86.5% |
| 1elvA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 26.0 | 3.38e-01 | 72.0% | 85.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953991 | 3012.1.1.12 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PF26571 | 0.98 | 77.0 | 8.50e-01 | 80.4% | 95.7% |
| 3960492 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.98 | 69.0 | 8.24e-01 | 76.2% | 100.0% |
| 3959334 | 3012.1.1.12 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PF26571 | 0.97 | 73.0 | 8.44e-01 | 82.1% | 100.0% |
| 1842335 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 41.0 | 4.36e-01 | 88.1% | 95.8% |
| 3962799 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.51 | 37.0 | 2.78e-01 | 88.1% | 30.6% |
D2
medium
residues 78-187_342-383
Domain cluster:
rep: MN698245.1__QGZ18159.1__HTVC111P_gp46__00046__D46-220
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 49.4 | 7.40e-13 | 73.7% | 42.3% |
D3
medium
residues 188-341
Domain cluster:
rep: OQ326496.2__WDQ45528.1__X__00060__D262-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 92.3 | 5.50e-26 | 81.8% | 62.2% |
D4
medium
residues 1439-1470_1484-1518