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BK061475.1__DBA08213.1__X__00035
Bact-VirBK061475.1__DBA08213.1__X__00035
Identity
- Accession:
- BK061475 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Peduoviridae›
Citexvirus›
Pseudomonas_phage_vB_PaeM-D14A
TaxID: 2965058
Cluster
View cluster (69 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-62
Domain cluster:
rep: OQ846916.1__WJJ55337.1__QB910_000093__00093__D4-64
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13560.13 best | HTH_31 | 39.2 | 9.70e-10 | 91.7% | 73.4% |
| PF01381.29 | HTH_3 | 40.2 | 3.90e-10 | 78.3% | 78.2% |
D2
medium
residues 69-112
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hjlA03 | 1.20.5.2020 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.83 | 56.0 | 5.74e-01 | 70.5% | 75.6% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.74 | 58.0 | 3.79e-01 | 84.1% | 78.5% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.72 | 53.0 | 4.23e-01 | 79.5% | 78.4% |
| 3vdpA01 | 1.10.8.420 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecR Domain 1 | 0.62 | 48.0 | 4.60e-01 | 84.1% | 92.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008186 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 70.0 | 5.07e-01 | 100.0% | 35.0% |
| 3922333 | 7025.1.1.3 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN52 | 0.67 | 58.0 | 5.31e-01 | 100.0% | 76.7% |