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BK061478.1__DBA08414.1__X__00061

Bact-Vir

BK061478.1__DBA08414.1__X__00061

Identity

Accession:
BK061478 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_vB_PaeS-D14E

TaxID: 2965061

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-131
PDB
Domain cluster: rep: SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00120__D59-153
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01381.29 best HTH_3 25.4 1.60e-05 43.3% 61.8%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 55.0 5.71e-01 70.0% 77.4%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 48.0 5.60e-01 76.7% 86.4%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 53.0 5.97e-01 73.3% 97.1%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 43.0 4.98e-01 78.9% 80.3%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 51.0 5.61e-01 75.6% 93.1%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 44.0 4.47e-01 70.0% 62.6%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 45.0 4.77e-01 72.2% 73.4%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 46.0 4.80e-01 74.4% 76.8%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 48.0 5.40e-01 74.4% 94.4%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 49.0 5.13e-01 78.9% 89.3%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 47.0 5.15e-01 82.2% 89.5%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 51.0 5.13e-01 83.3% 92.1%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.59 46.0 4.17e-01 85.6% 92.2%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.58 45.0 4.02e-01 84.4% 65.6%
3futA02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.55 37.0 4.18e-01 70.0% 98.5%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.53 41.0 2.87e-01 84.4% 98.1%
2mb9A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.53 38.0 3.63e-01 75.6% 76.4%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 39.0 3.43e-01 83.3% 83.2%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.51 44.0 4.11e-01 97.8% 92.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3278243 101.1.4.10 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1870 0.89 59.0 5.24e-01 72.2% 50.8%
2057229 101.1.4.23 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MqsA_antitoxin 0.82 55.0 6.18e-01 71.1% 89.9%
3964522 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 55.0 6.43e-01 71.1% 98.4%
167148 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 55.0 5.71e-01 70.0% 77.4%
4957698 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 63.0 5.54e-01 84.4% 73.6%
None — 0.77 48.0 5.60e-01 73.3% 87.7%
2581392 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 48.0 5.33e-01 81.1% 81.7%
5040644 101.1.4.93 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre-like-HTH 0.75 59.0 5.19e-01 83.3% 90.0%
2787 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 52.0 5.96e-01 71.1% 98.5%
3504520 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 52.0 5.00e-01 71.1% 72.0%
1779783 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 51.0 5.47e-01 71.1% 82.1%
5082802 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 54.0 5.25e-01 76.7% 83.0%
3280985 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.73 51.0 5.12e-01 74.4% 71.1%
3955282 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 48.0 5.17e-01 74.4% 81.3%
4392992 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 46.0 4.90e-01 74.4% 73.8%
4971248 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 49.0 5.48e-01 71.1% 100.0%
4935348 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 51.0 5.43e-01 75.6% 96.2%
1320087 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 48.0 5.42e-01 70.0% 88.6%
5015557 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 51.0 5.01e-01 74.4% 77.9%
None — 0.71 49.0 5.39e-01 72.2% 88.0%
3277922 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 46.0 5.05e-01 74.4% 81.3%
3591049 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 54.0 4.50e-01 83.3% 61.3%
4956880 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 50.0 5.56e-01 82.2% 98.6%
4032747 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 54.0 5.52e-01 84.4% 95.3%