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BK061480.1__DBA08538.1__X__00066
Bact-VirBK061480.1__DBA08538.1__X__00066
Identity
- Accession:
- BK061480 ↗
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-111
Domain cluster:
rep: MN082625.1__QDH50351.1__KAREZI_31__00031__D2-93
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.68 | 50.0 | 3.73e-01 | 75.2% | 92.6% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.66 | 48.0 | 3.68e-01 | 75.2% | 94.0% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.65 | 47.0 | 4.45e-01 | 75.2% | 96.1% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.63 | 45.0 | 3.76e-01 | 74.3% | 85.0% |
| 6dnzA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.63 | 46.0 | 3.87e-01 | 75.2% | 99.4% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 45.0 | 4.24e-01 | 75.2% | 94.8% |
| 3e1eC00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 45.0 | 4.12e-01 | 75.2% | 91.5% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 55.0 | 3.96e-01 | 96.3% | 91.4% |
| 2fs2B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 44.0 | 4.09e-01 | 75.2% | 90.6% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.61 | 42.0 | 2.98e-01 | 71.6% | 30.8% |
| 1wzvA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.60 | 53.0 | 4.82e-01 | 99.1% | 86.0% |
| 7x7zA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.60 | 46.0 | 4.25e-01 | 80.7% | 95.7% |
| 5tz6B02 | 3.10.129.120 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.60 | 44.0 | 3.89e-01 | 76.1% | 88.3% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.59 | 46.0 | 4.29e-01 | 81.7% | 100.0% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 50.0 | 4.49e-01 | 91.7% | 68.6% |
| 3e8pA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 43.0 | 3.88e-01 | 76.1% | 93.5% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 50.0 | 4.53e-01 | 94.5% | 90.2% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.81e-01 | 72.5% | 33.4% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 4.10e-01 | 88.1% | 64.3% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.57 | 48.0 | 4.58e-01 | 91.7% | 97.7% |
| 1i12D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 44.0 | 3.90e-01 | 83.5% | 89.8% |
| 3hduA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 41.0 | 3.70e-01 | 78.0% | 95.4% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 45.0 | 3.52e-01 | 89.9% | 46.4% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.54 | 44.0 | 4.50e-01 | 89.9% | 89.0% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 42.0 | 3.67e-01 | 85.3% | 65.7% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 44.0 | 3.46e-01 | 90.8% | 81.0% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.53 | 36.0 | 3.59e-01 | 76.1% | 67.0% |
| 2fa1A00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 41.0 | 3.63e-01 | 81.7% | 89.3% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 42.0 | 2.95e-01 | 90.8% | 73.0% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 38.0 | 3.06e-01 | 80.7% | 87.5% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.99e-01 | 89.9% | 93.0% |
| 2cwzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 36.0 | 3.35e-01 | 74.3% | 83.9% |
| 2ikkA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.50 | 38.0 | 3.48e-01 | 78.9% | 94.5% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 40.0 | 2.83e-01 | 88.1% | 36.6% |
| 3ddvB01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.50 | 37.0 | 3.47e-01 | 76.1% | 100.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3169052 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.70 | 57.0 | 3.67e-01 | 87.2% | 26.1% |
| 4990953 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.68 | 54.0 | 5.17e-01 | 83.5% | 79.0% |
| 4059480 | 881.1.1.37 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 | 0.68 | 47.0 | 3.98e-01 | 70.6% | 45.7% |
| 4991720 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.67 | 52.0 | 5.00e-01 | 82.6% | 77.6% |
| 5044412 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.66 | 49.0 | 3.71e-01 | 76.1% | 87.3% |
| 3589829 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.65 | 48.0 | 4.90e-01 | 76.1% | 96.2% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 57.0 | 5.44e-01 | 97.2% | 100.0% |
| 4660347 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.62 | 54.0 | 3.88e-01 | 94.5% | 89.5% |
| 3242948 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.62 | 44.0 | 3.48e-01 | 74.3% | 79.6% |
| 4024578 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.61 | 55.0 | 4.92e-01 | 100.0% | 78.1% |
| 3178087 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.61 | 42.0 | 3.90e-01 | 78.9% | 56.3% |
| 1933307 | 9.13.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like | 0.61 | 47.0 | 4.53e-01 | 80.7% | 79.7% |
| 3261416 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.59 | 48.0 | 4.39e-01 | 85.3% | 75.7% |
| 3198929 | 331.4.1.3 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor | 0.59 | 46.0 | 4.25e-01 | 83.5% | 81.9% |
| 3676028 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.58 | 48.0 | 3.68e-01 | 89.9% | 48.4% |
| 3339570 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.57 | 47.0 | 3.66e-01 | 89.9% | 47.6% |
| 3345243 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.57 | 48.0 | 3.73e-01 | 91.7% | 50.4% |
| 3818651 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.57 | 47.0 | 3.61e-01 | 91.7% | 45.7% |
| 3807410 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.57 | 46.0 | 3.62e-01 | 89.0% | 46.7% |
| 4015592 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.55 | 44.0 | 3.71e-01 | 87.2% | 89.1% |
| 4880357 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.55 | 46.0 | 4.36e-01 | 90.8% | 87.3% |
| 3867718 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 44.0 | 4.15e-01 | 90.8% | 89.6% |
| 4960887 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.53 | 37.0 | 3.72e-01 | 73.4% | 87.8% |
| 3266025 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 45.0 | 3.45e-01 | 95.4% | 43.0% |
| 4967348 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.51 | 37.0 | 3.68e-01 | 73.4% | 88.6% |
| 4927674 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.51 | 37.0 | 3.35e-01 | 73.4% | 76.4% |
| 3224107 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 41.0 | 2.86e-01 | 92.7% | 47.3% |